Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Gm44256-201ENSMUST00000203304 335 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Gm43992-201ENSMUST00000204358 197 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Gm44688-201ENSMUST00000209083 537 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Gm18015-201ENSMUST00000214879 316 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.82□□□□□ -1.96
Ccdc3Q9D6Y1 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm23911-201ENSMUST00000104596 134 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm22141-201ENSMUST00000157403 277 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm27155-201ENSMUST00000183716 898 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm27163-201ENSMUST00000184767 409 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm19885-201ENSMUST00000212853 343 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm10025-201ENSMUST00000079568 372 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc3Q9D6Y1 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm25341-201ENSMUST00000157461 268 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm17166-201ENSMUST00000172006 431 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Mir5123-201ENSMUST00000177794 83 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm27477-201ENSMUST00000184649 143 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm27700-201ENSMUST00000185003 81 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm38329-201ENSMUST00000193473 427 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm42578-201ENSMUST00000199960 194 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 AC154730.1-201ENSMUST00000227874 816 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm24611-201ENSMUST00000083272 107 ntBASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc3Q9D6Y1 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm25647-201ENSMUST00000101832 78 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm25823-201ENSMUST00000101995 78 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm25097-201ENSMUST00000104042 145 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm13273-201ENSMUST00000119737 159 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm11446-201ENSMUST00000121319 866 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm23792-201ENSMUST00000122557 93 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm23213-201ENSMUST00000122715 313 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm23167-201ENSMUST00000157155 103 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm24220-201ENSMUST00000177753 79 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm25988-201ENSMUST00000177759 79 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm23471-201ENSMUST00000177886 79 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm26488-201ENSMUST00000178225 79 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm21809-201ENSMUST00000178495 468 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm23449-201ENSMUST00000179208 79 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm25221-201ENSMUST00000180051 79 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 121 ms