Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim42Q9D2H5 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm23705-201ENSMUST00000104370 130 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm14825-201ENSMUST00000113538 701 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm12039-201ENSMUST00000118219 180 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm12647-201ENSMUST00000118977 265 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm14516-201ENSMUST00000120012 252 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm25390-201ENSMUST00000157341 103 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm22598-201ENSMUST00000157600 127 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm25430-201ENSMUST00000157614 289 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm26489-201ENSMUST00000157880 264 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm23280-201ENSMUST00000157905 139 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Scarna13-201ENSMUST00000158164 275 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm22389-201ENSMUST00000158193 301 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm17065-201ENSMUST00000165245 239 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm22308-201ENSMUST00000177609 107 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm26585-201ENSMUST00000180890 630 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Mir6393-201ENSMUST00000183709 94 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm27602-201ENSMUST00000183861 111 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm27855-201ENSMUST00000184122 128 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm44977-201ENSMUST00000205283 420 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm22704-201ENSMUST00000083027 137 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Mir471-201ENSMUST00000093596 67 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim42Q9D2H5 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm23841-201ENSMUST00000116951 114 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm15783-201ENSMUST00000117521 633 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm15195-201ENSMUST00000118775 263 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm22514-201ENSMUST00000122547 308 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm23759-201ENSMUST00000158351 268 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm22530-201ENSMUST00000158820 118 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Mir6336-201ENSMUST00000183581 130 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Mir6921-201ENSMUST00000183719 80 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm2914-201ENSMUST00000186120 328 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm28163-201ENSMUST00000187099 325 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Igkv4-65-201ENSMUST00000196986 358 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm43501-201ENSMUST00000202513 107 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm44922-201ENSMUST00000206690 90 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 CT954323.1-201ENSMUST00000222774 229 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm25260-201ENSMUST00000083053 134 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm23677-201ENSMUST00000083156 104 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm8935-202ENSMUST00000105727 1959 ntBASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trim42Q9D2H5 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms