Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ddx56Q9D0R4 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Ddx56Q9D0R4 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ddx56Q9D0R4 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm24096-201ENSMUST00000103905 110 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm11577-201ENSMUST00000118030 737 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm11262-201ENSMUST00000119326 833 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm14714-201ENSMUST00000119743 439 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm25967-201ENSMUST00000157168 147 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm25637-201ENSMUST00000157529 107 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm11395-201ENSMUST00000181011 499 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm11394-201ENSMUST00000181421 517 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm19620-201ENSMUST00000195972 434 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm5322-201ENSMUST00000206142 699 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm44910-201ENSMUST00000208451 396 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm23464-201ENSMUST00000083145 147 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ddx56Q9D0R4 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Ddx56Q9D0R4 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.46□□□□□ -1.69
Ddx56Q9D0R4 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.46□□□□□ -1.69
Ddx56Q9D0R4 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm23226-201ENSMUST00000116927 103 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm12902-201ENSMUST00000118389 322 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm12268-201ENSMUST00000118398 442 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm11785-201ENSMUST00000120165 601 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm23591-201ENSMUST00000157663 286 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm24240-201ENSMUST00000157785 135 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm24439-201ENSMUST00000157894 117 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm4222-201ENSMUST00000165784 470 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm24464-201ENSMUST00000179697 107 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm27999-201ENSMUST00000183539 193 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm27899-201ENSMUST00000184715 64 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm42622-201ENSMUST00000197229 355 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm42814-201ENSMUST00000199370 460 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm19908-201ENSMUST00000204684 391 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm5670-201ENSMUST00000093546 372 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ddx56Q9D0R4 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm10552-201ENSMUST00000113396 372 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm11698-201ENSMUST00000117948 455 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm15443-201ENSMUST00000118947 820 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm12900-201ENSMUST00000120919 573 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm5379-201ENSMUST00000120973 826 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm14694-201ENSMUST00000121856 282 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Mir6341-201ENSMUST00000183490 121 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm29228-201ENSMUST00000185489 418 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm37658-201ENSMUST00000192672 315 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm37495-201ENSMUST00000194590 264 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Trbv24-201ENSMUST00000194614 347 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Gm37836-201ENSMUST00000195875 175 ntBASIC4.45□□□□□ -1.7
Ddx56Q9D0R4 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms