Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm8858-201ENSMUST00000118259 342 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm12891-201ENSMUST00000119358 240 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm11891-201ENSMUST00000121241 619 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm6058-201ENSMUST00000154261 399 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm25058-201ENSMUST00000157365 128 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm22219-201ENSMUST00000157562 319 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm22501-201ENSMUST00000158981 127 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Mir1251-201ENSMUST00000175486 84 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm22908-201ENSMUST00000177620 110 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm6625-201ENSMUST00000177870 272 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Mir6975-201ENSMUST00000184879 61 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm28802-201ENSMUST00000188624 944 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm17838-201ENSMUST00000205872 876 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm45539-201ENSMUST00000210313 428 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm17829-201ENSMUST00000219782 344 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddx28Q9CWT6 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.46□□□□□ -1.85
Ddx28Q9CWT6 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.46□□□□□ -1.85
Ddx28Q9CWT6 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm6923-201ENSMUST00000118343 406 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm11692-201ENSMUST00000122121 902 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm2020-201ENSMUST00000145242 579 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm24910-201ENSMUST00000157289 272 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm24961-201ENSMUST00000157918 184 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm24976-201ENSMUST00000158972 135 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm8296-201ENSMUST00000185597 524 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm19774-201ENSMUST00000190667 114 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm38075-201ENSMUST00000191979 920 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm37845-201ENSMUST00000194977 355 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm43441-201ENSMUST00000201458 205 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm44076-201ENSMUST00000203072 520 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm45226-201ENSMUST00000206602 288 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm18672-201ENSMUST00000208035 270 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm45162-201ENSMUST00000209013 618 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AC130823.2-201ENSMUST00000226169 290 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Olfr713-201ENSMUST00000098139 975 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ddx28Q9CWT6 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Gm23271-201ENSMUST00000104052 124 ntBASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Gm25563-201ENSMUST00000104603 74 ntBASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Gm24831-201ENSMUST00000116778 126 ntBASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Gm11923-201ENSMUST00000118135 508 ntBASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.45□□□□□ -1.86
Ddx28Q9CWT6 Gm15364-201ENSMUST00000119618 585 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms