Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 Gm28354-201ENSMUST00000190904 678 ntBASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Rpa3Q9CQ71 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm15399-201ENSMUST00000118055 724 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm24240-201ENSMUST00000157785 135 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm25555-201ENSMUST00000158078 111 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm30341-201ENSMUST00000194363 289 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm43345-201ENSMUST00000199484 269 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm18660-201ENSMUST00000199542 629 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm34314-201ENSMUST00000203622 367 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm18015-201ENSMUST00000214879 316 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm25810-201ENSMUST00000082752 108 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Mir193a-201ENSMUST00000083461 66 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Olfr1160-201ENSMUST00000099839 960 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.86□□□□□ -1.95
Rpa3Q9CQ71 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm9119-201ENSMUST00000118866 495 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm14506-201ENSMUST00000121165 536 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm25373-201ENSMUST00000158156 115 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm24681-201ENSMUST00000158760 107 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm19203-201ENSMUST00000174049 939 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm6991-201ENSMUST00000218475 1178 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm22249-201ENSMUST00000082485 136 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm23447-201ENSMUST00000082798 163 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Rpa3Q9CQ71 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm25097-201ENSMUST00000104042 145 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm23128-201ENSMUST00000104257 132 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm12782-201ENSMUST00000117519 727 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm12392-201ENSMUST00000118014 938 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm11577-201ENSMUST00000118030 737 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm16383-201ENSMUST00000118122 232 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm11321-201ENSMUST00000121257 902 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm17117-201ENSMUST00000163665 299 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm3370-201ENSMUST00000171785 500 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Mir3965-201ENSMUST00000175570 69 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Mir6405-201ENSMUST00000184584 124 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm28847-201ENSMUST00000186778 700 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm29365-201ENSMUST00000189461 699 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm17967-201ENSMUST00000195319 647 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm23128-202ENSMUST00000196578 133 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm19177-201ENSMUST00000204520 613 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm23847-201ENSMUST00000083829 110 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.84□□□□□ -1.95
Rpa3Q9CQ71 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.84□□□□□ -1.96
Rpa3Q9CQ71 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
Rpa3Q9CQ71 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Rpa3Q9CQ71 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms