Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm11429-201ENSMUST00000119089 144 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm23466-201ENSMUST00000157133 106 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm23982-201ENSMUST00000157141 106 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm22447-201ENSMUST00000158155 92 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm23806-201ENSMUST00000175157 109 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm27653-201ENSMUST00000185037 136 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm37609-201ENSMUST00000191778 678 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm19901-201ENSMUST00000192191 495 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm45778-201ENSMUST00000211959 153 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 AC108416.2-201ENSMUST00000226792 367 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm22807-201ENSMUST00000082737 129 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm22126-201ENSMUST00000083244 142 ntBASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhgb4Q91XX6 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.84□□□□□ -1.48
Pcdhgb4Q91XX6 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.84□□□□□ -1.48
Pcdhgb4Q91XX6 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm14748-201ENSMUST00000119819 411 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm25660-201ENSMUST00000158470 104 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm23408-201ENSMUST00000158523 265 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm43501-201ENSMUST00000202513 107 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm18991-201ENSMUST00000209225 746 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm10709-201ENSMUST00000213318 480 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm26457-201ENSMUST00000082678 78 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhgb4Q91XX6 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm12125-201ENSMUST00000117261 736 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm12568-201ENSMUST00000117362 624 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm23774-201ENSMUST00000158990 131 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm17100-201ENSMUST00000168963 272 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm17186-201ENSMUST00000171742 456 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Mir6516-201ENSMUST00000196236 110 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Mir376a-201ENSMUST00000197584 68 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm23650-201ENSMUST00000083355 70 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Pcdhgb4Q91XX6 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdhgb4Q91XX6 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Pcdhgb4Q91XX6 Gm36969-201ENSMUST00000194551 2809 ntBASIC5.81□□□□□ -1.48
Pcdhgb4Q91XX6 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdhgb4Q91XX6 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Pcdhgb4Q91XX6 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms