Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm43954-201ENSMUST00000204634 544 ntBASIC2.18□□□□□ -2.06
Nup35Q8R4R6 Gm36776-201ENSMUST00000207006 203 ntBASIC2.18□□□□□ -2.06
Nup35Q8R4R6 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.18□□□□□ -2.06
Nup35Q8R4R6 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Nup35Q8R4R6 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Nup35Q8R4R6 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Nup35Q8R4R6 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Nup35Q8R4R6 Gm9597-202ENSMUST00000227632 1387 ntBASIC2.18□□□□□ -2.06
Nup35Q8R4R6 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.18□□□□□ -2.06
Nup35Q8R4R6 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Snora36b-201ENSMUST00000104383 132 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm14579-201ENSMUST00000117068 283 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm16383-201ENSMUST00000118122 232 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm14352-201ENSMUST00000119250 449 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm14159-201ENSMUST00000119832 451 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm15799-201ENSMUST00000120899 289 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm25360-201ENSMUST00000178786 191 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm6615-201ENSMUST00000199426 631 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm32381-201ENSMUST00000203192 476 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm43991-201ENSMUST00000203751 274 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm44727-201ENSMUST00000204225 451 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm45078-201ENSMUST00000205343 546 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm44824-201ENSMUST00000207021 229 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nup35Q8R4R6 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm22658-201ENSMUST00000104196 155 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm24792-201ENSMUST00000104286 128 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm23911-201ENSMUST00000104596 134 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm14739-201ENSMUST00000120424 802 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm14506-201ENSMUST00000121165 536 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm26099-201ENSMUST00000157248 109 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm25185-201ENSMUST00000157754 96 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm20718-201ENSMUST00000176058 259 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm8649-201ENSMUST00000181799 233 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Mir7242-201ENSMUST00000183710 79 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Mir6363-201ENSMUST00000184880 114 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm29597-201ENSMUST00000188035 308 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm45316-201ENSMUST00000210128 162 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Gm24446-201ENSMUST00000083982 156 ntBASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Nup35Q8R4R6 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Nup35Q8R4R6 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Nup35Q8R4R6 Gm23577-201ENSMUST00000103950 110 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm22939-201ENSMUST00000103958 131 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm26075-201ENSMUST00000104062 121 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm26411-201ENSMUST00000157668 107 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm24745-201ENSMUST00000157840 85 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm25898-201ENSMUST00000158303 106 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm18520-201ENSMUST00000174783 658 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Mir6353-201ENSMUST00000183596 113 ntBASIC2.15□□□□□ -2.07
Nup35Q8R4R6 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.15□□□□□ -2.07
Nup35Q8R4R6 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms