Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm23608-201ENSMUST00000104545 128 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm15752-201ENSMUST00000117427 394 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm11576-201ENSMUST00000117433 417 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm13672-201ENSMUST00000117554 459 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm14880-201ENSMUST00000117581 292 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm11862-201ENSMUST00000119678 659 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm13932-201ENSMUST00000120873 610 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm11849-201ENSMUST00000121293 261 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm14303-201ENSMUST00000121320 171 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm23214-201ENSMUST00000122716 157 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm23499-201ENSMUST00000157736 268 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm25534-201ENSMUST00000175365 125 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm29484-201ENSMUST00000186067 324 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm28830-201ENSMUST00000188192 213 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm29196-201ENSMUST00000189239 618 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm42665-201ENSMUST00000202100 586 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm5322-201ENSMUST00000206142 699 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Clrn1Q8K445 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.23□□□□□ -1.73
Clrn1Q8K445 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm23679-201ENSMUST00000083161 119 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Clrn1Q8K445 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.23□□□□□ -1.73
Clrn1Q8K445 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm24951-201ENSMUST00000102182 109 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm22473-201ENSMUST00000104114 132 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm12571-201ENSMUST00000118132 243 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm14516-201ENSMUST00000120012 252 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm15147-201ENSMUST00000122263 483 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm12226-201ENSMUST00000144172 876 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm22849-201ENSMUST00000157713 307 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Mir5099-201ENSMUST00000175257 74 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm23660-201ENSMUST00000178362 79 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm24088-201ENSMUST00000179100 79 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm27457-201ENSMUST00000184771 156 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm28951-201ENSMUST00000190742 313 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm43510-201ENSMUST00000197922 353 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm44059-201ENSMUST00000204048 351 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm34224-201ENSMUST00000204606 364 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm44765-201ENSMUST00000206927 601 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm44927-201ENSMUST00000207573 716 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm45499-201ENSMUST00000211656 280 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm45730-201ENSMUST00000212560 395 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm2829-201ENSMUST00000213121 499 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm17779-201ENSMUST00000213395 394 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm19326-201ENSMUST00000219818 326 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clrn1Q8K445 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.22□□□□□ -1.73
Clrn1Q8K445 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.21□□□□□ -1.73
Clrn1Q8K445 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.21□□□□□ -1.73
Clrn1Q8K445 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.21□□□□□ -1.73
Clrn1Q8K445 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm14823-201ENSMUST00000117698 238 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm11577-201ENSMUST00000118030 737 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm11262-201ENSMUST00000119326 833 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm12237-201ENSMUST00000120158 470 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms