Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm43107-201ENSMUST00000198729 255 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm25308-201ENSMUST00000104171 158 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm22072-201ENSMUST00000116850 121 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm12268-201ENSMUST00000118398 442 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm14240-201ENSMUST00000120353 546 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm5958-201ENSMUST00000147698 297 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm23470-201ENSMUST00000157129 120 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm24291-201ENSMUST00000157633 162 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm23380-201ENSMUST00000158448 103 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm22853-201ENSMUST00000174974 131 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm38311-201ENSMUST00000192945 165 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm19253-201ENSMUST00000204279 307 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm45742-201ENSMUST00000212400 433 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm22970-201ENSMUST00000083304 186 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc28aQ8CEI3 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm11693-201ENSMUST00000119625 565 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm12755-201ENSMUST00000122297 282 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm24553-201ENSMUST00000158653 131 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm18727-201ENSMUST00000185981 553 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm44348-201ENSMUST00000200165 122 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm45678-201ENSMUST00000210509 295 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc28aQ8CEI3 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm12492-201ENSMUST00000117665 564 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm23600-201ENSMUST00000157260 71 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm25280-201ENSMUST00000157269 101 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm22730-201ENSMUST00000158085 171 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm16232-201ENSMUST00000162856 167 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm24520-201ENSMUST00000179510 110 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm27698-201ENSMUST00000184060 249 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm6140-201ENSMUST00000192494 966 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm23447-201ENSMUST00000082798 163 ntBASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ccdc28aQ8CEI3 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc28aQ8CEI3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Ccdc28aQ8CEI3 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Ccdc28aQ8CEI3 Gm13329-201ENSMUST00000117063 265 ntBASIC2.7□□□□□ -1.98
Ccdc28aQ8CEI3 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc28aQ8CEI3 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc28aQ8CEI3 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC2.7□□□□□ -1.98
Ccdc28aQ8CEI3 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.7□□□□□ -1.98
Ccdc28aQ8CEI3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms