Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm24914-201ENSMUST00000157285 313 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm26312-201ENSMUST00000157769 165 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25386-201ENSMUST00000157814 288 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm22211-201ENSMUST00000158097 156 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm27903-201ENSMUST00000175482 126 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7438-201ENSMUST00000177664 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7408-201ENSMUST00000178014 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7386-201ENSMUST00000178020 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm3657-201ENSMUST00000178170 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7415-201ENSMUST00000178205 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7398-201ENSMUST00000178589 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7391-201ENSMUST00000178680 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7375-201ENSMUST00000179232 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm3681-201ENSMUST00000179940 639 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm27538-201ENSMUST00000185065 294 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7946-201ENSMUST00000203326 958 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm45872-201ENSMUST00000209804 1584 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm35262-201ENSMUST00000215133 267 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm35405-201ENSMUST00000218754 400 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 AC123062.1-201ENSMUST00000221287 481 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm12582-201ENSMUST00000030555 697 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23447-201ENSMUST00000082798 163 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Gm24490-201ENSMUST00000083803 98 ntBASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Mir551b-201ENSMUST00000102165 98 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Mir291a-201ENSMUST00000104815 82 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm15560-201ENSMUST00000117107 643 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14887-201ENSMUST00000119522 663 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm12045-201ENSMUST00000122122 573 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm22960-201ENSMUST00000122517 104 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm22390-201ENSMUST00000157588 325 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25913-201ENSMUST00000157617 135 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm22120-201ENSMUST00000175590 70 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Mir7j-201ENSMUST00000184427 122 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm6501-201ENSMUST00000187178 916 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm38098-201ENSMUST00000194115 241 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm43550-201ENSMUST00000200597 303 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm5322-201ENSMUST00000206142 699 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm4558-201ENSMUST00000207886 521 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm45553-201ENSMUST00000209929 507 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 AC166574.3-201ENSMUST00000226725 367 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25205-201ENSMUST00000082841 103 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Snord22-201ENSMUST00000083153 126 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.39□□□□□ -1.87
Ccdc28bQ8CEG5 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25213-201ENSMUST00000102388 113 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm26145-201ENSMUST00000104476 127 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14906-201ENSMUST00000119265 390 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Snrpert-201ENSMUST00000121967 279 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm22107-201ENSMUST00000122548 100 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm24211-201ENSMUST00000158264 107 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm26173-201ENSMUST00000158416 136 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm17030-201ENSMUST00000167016 393 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23365-201ENSMUST00000175019 125 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25960-201ENSMUST00000175110 125 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44453-201ENSMUST00000175161 126 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms