Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm5372-201ENSMUST00000187540 409 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm29256-201ENSMUST00000189094 312 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm28484-201ENSMUST00000190606 312 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm30280-201ENSMUST00000192214 262 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm8132-201ENSMUST00000204938 640 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm44654-201ENSMUST00000208052 329 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm8423-201ENSMUST00000211387 607 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Gm7093-201ENSMUST00000223004 581 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trerf1Q8BXJ2 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Mir592-201ENSMUST00000102113 96 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm23273-201ENSMUST00000104058 135 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm26019-201ENSMUST00000104407 119 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Igkv13-87-201ENSMUST00000114214 286 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm12568-201ENSMUST00000117362 624 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm12173-201ENSMUST00000117622 273 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm14753-201ENSMUST00000118503 246 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm13482-201ENSMUST00000119842 254 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm11506-201ENSMUST00000122414 470 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm25883-201ENSMUST00000157781 271 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm22789-201ENSMUST00000157884 130 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm20542-201ENSMUST00000174582 372 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm22108-201ENSMUST00000177961 106 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm24798-201ENSMUST00000179334 106 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm18488-201ENSMUST00000215082 364 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm2628-201ENSMUST00000218019 426 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm31849-201ENSMUST00000220306 375 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm23378-201ENSMUST00000082942 107 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Mir346-201ENSMUST00000083547 98 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trerf1Q8BXJ2 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm23256-201ENSMUST00000102235 110 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm26140-201ENSMUST00000103807 110 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm14926-201ENSMUST00000120650 508 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm12095-201ENSMUST00000121962 816 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm22135-201ENSMUST00000158752 108 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm22908-201ENSMUST00000177620 110 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm22584-201ENSMUST00000177935 92 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Mir496b-201ENSMUST00000184935 113 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm37603-201ENSMUST00000192368 219 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm37889-201ENSMUST00000194174 251 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm37817-201ENSMUST00000195276 434 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm34783-201ENSMUST00000209159 303 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm45673-201ENSMUST00000210293 358 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC4.25□□□□□ -1.73
Trerf1Q8BXJ2 Gm20304-201ENSMUST00000218168 444 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms