Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm25563-201ENSMUST00000104603 74 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm10552-201ENSMUST00000113396 372 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm15167-201ENSMUST00000121997 187 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm2020-201ENSMUST00000145242 579 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm26320-201ENSMUST00000157742 306 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm25185-201ENSMUST00000157754 96 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm23198-201ENSMUST00000158811 91 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm7786-201ENSMUST00000210494 436 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm2446-201ENSMUST00000220144 772 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm5176-202ENSMUST00000220267 583 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm23443-201ENSMUST00000082916 128 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr713-201ENSMUST00000098139 975 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp40Q8BWR4 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm24935-201ENSMUST00000103770 110 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm14558-201ENSMUST00000117458 381 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm12230-201ENSMUST00000118301 454 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm27636-201ENSMUST00000184528 122 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm28094-201ENSMUST00000185262 390 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm28995-201ENSMUST00000186625 261 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm43115-201ENSMUST00000196244 160 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 AC160016.1-201ENSMUST00000215589 448 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp40Q8BWR4 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm14681-201ENSMUST00000118047 411 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm13085-201ENSMUST00000118356 171 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm12693-201ENSMUST00000121965 483 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm22059-201ENSMUST00000157544 104 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm22348-201ENSMUST00000178674 79 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm5527-201ENSMUST00000179821 642 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm27161-201ENSMUST00000183960 562 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm18505-201ENSMUST00000187360 790 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm17990-201ENSMUST00000211728 553 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm8106-201ENSMUST00000213123 523 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm18120-201ENSMUST00000220079 511 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm4036-201ENSMUST00000220842 626 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm23623-201ENSMUST00000082461 107 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm26176-201ENSMUST00000083795 105 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm10794-201ENSMUST00000099624 207 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.49□□□□□ -1.53
Usp40Q8BWR4 Gm43870-201ENSMUST00000205102 4369 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms