Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm24118-201ENSMUST00000103972 126 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm13761-201ENSMUST00000117238 807 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm15110-201ENSMUST00000117545 881 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm22107-201ENSMUST00000122548 100 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm25979-201ENSMUST00000157177 138 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm24061-201ENSMUST00000157489 120 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm22532-201ENSMUST00000158822 140 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm29389-201ENSMUST00000191562 352 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm42958-201ENSMUST00000197595 318 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm43899-201ENSMUST00000203675 246 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm44513-201ENSMUST00000206811 439 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm18892-201ENSMUST00000217628 881 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm9765-201ENSMUST00000043170 321 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm10237-201ENSMUST00000078393 273 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Snora70-201ENSMUST00000083047 137 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Gm22739-201ENSMUST00000083437 160 ntBASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nup54Q8BTS4 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm26423-201ENSMUST00000104277 128 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm13731-201ENSMUST00000117332 196 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm13678-201ENSMUST00000118926 340 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm13273-201ENSMUST00000119737 159 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm14845-201ENSMUST00000121259 306 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm25883-201ENSMUST00000157781 271 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm23312-201ENSMUST00000158774 102 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm24520-201ENSMUST00000179510 110 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm28141-201ENSMUST00000186676 342 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm28926-201ENSMUST00000191063 680 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm43070-201ENSMUST00000196938 415 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm45063-201ENSMUST00000203726 472 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm44118-201ENSMUST00000204665 229 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm18225-201ENSMUST00000216708 742 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm8249-201ENSMUST00000219225 465 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 AF357341-201ENSMUST00000083088 75 ntBASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nup54Q8BTS4 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Mir1193-201ENSMUST00000116761 121 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Mir6914-201ENSMUST00000184999 69 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm37085-201ENSMUST00000193780 196 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm43198-201ENSMUST00000200927 326 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm8423-201ENSMUST00000211387 607 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm5175-202ENSMUST00000219699 529 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Olfr815-201ENSMUST00000071557 951 ntBASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nup54Q8BTS4 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms