Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Ccdc40Q8BI79 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Ccdc40Q8BI79 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.46□□□□□ -1.85
Ccdc40Q8BI79 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Gm15399-201ENSMUST00000118055 724 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Gm42621-201ENSMUST00000198114 275 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Gm5551-201ENSMUST00000199720 690 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Gm4987-201ENSMUST00000078326 408 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Gm22575-201ENSMUST00000082981 110 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Gm25126-201ENSMUST00000083343 102 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.46□□□□□ -1.86
Ccdc40Q8BI79 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm3940-201ENSMUST00000105087 432 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm9009-201ENSMUST00000117321 326 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm12891-201ENSMUST00000119358 240 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm13692-201ENSMUST00000120774 371 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm14129-201ENSMUST00000122436 291 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm18486-201ENSMUST00000184040 298 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm45245-201ENSMUST00000210082 376 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc40Q8BI79 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm24792-201ENSMUST00000104286 128 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm15025-201ENSMUST00000118434 418 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm13873-201ENSMUST00000119208 427 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm23463-201ENSMUST00000122468 99 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm22957-201ENSMUST00000122511 123 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm22059-201ENSMUST00000157544 104 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm24998-201ENSMUST00000157908 89 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm17186-201ENSMUST00000171742 456 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm20612-201ENSMUST00000176318 236 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Mir6413-201ENSMUST00000184049 108 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm27698-201ENSMUST00000184060 249 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm28785-201ENSMUST00000187478 379 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm20776-201ENSMUST00000189940 700 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm29330-201ENSMUST00000190032 699 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm28098-201ENSMUST00000191361 699 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm18956-201ENSMUST00000192857 480 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm19030-201ENSMUST00000194947 552 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm6510-201ENSMUST00000195916 574 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm43227-201ENSMUST00000202239 677 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm18116-201ENSMUST00000220920 537 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Mir27a-201ENSMUST00000083510 87 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms