Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm42606-201ENSMUST00000114209 239 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm14469-201ENSMUST00000118363 202 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm11448-201ENSMUST00000120427 450 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm25883-201ENSMUST00000157781 271 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm24534-201ENSMUST00000157949 291 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm25436-201ENSMUST00000158275 145 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm22840-201ENSMUST00000158444 136 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm22716-201ENSMUST00000177596 107 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm7094-201ENSMUST00000178379 366 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Mir6382-201ENSMUST00000184055 110 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm37001-201ENSMUST00000193377 190 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm6240-201ENSMUST00000208014 473 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm45245-201ENSMUST00000210082 376 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm9068-201ENSMUST00000217393 455 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm3829-201ENSMUST00000222362 619 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm7117-201ENSMUST00000071515 387 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ddx55Q6ZPL9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm12509-201ENSMUST00000118033 609 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm13454-201ENSMUST00000118166 483 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm14415-201ENSMUST00000118260 1578 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm14359-201ENSMUST00000118883 424 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm14392-201ENSMUST00000120332 401 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm9498-201ENSMUST00000140849 291 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm22851-201ENSMUST00000178741 94 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm25074-201ENSMUST00000178782 94 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm22631-201ENSMUST00000179656 94 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm19503-201ENSMUST00000187109 241 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm42924-201ENSMUST00000197261 185 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm44376-201ENSMUST00000197570 128 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm3010-201ENSMUST00000198805 448 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm43407-201ENSMUST00000199816 317 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm44961-201ENSMUST00000207450 196 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm45162-201ENSMUST00000209013 618 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm7540-201ENSMUST00000219764 926 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 AC160962.2-201ENSMUST00000224761 632 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Ear14-201ENSMUST00000049559 468 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Mir19a-201ENSMUST00000083482 82 ntBASIC4.59□□□□□ -1.67
Ddx55Q6ZPL9 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Ddx55Q6ZPL9 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Ddx55Q6ZPL9 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Ddx55Q6ZPL9 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.59□□□□□ -1.68
Ddx55Q6ZPL9 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.59□□□□□ -1.68
Ddx55Q6ZPL9 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ddx55Q6ZPL9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.58□□□□□ -1.68
Ddx55Q6ZPL9 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Ddx55Q6ZPL9 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx55Q6ZPL9 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx55Q6ZPL9 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Ddx55Q6ZPL9 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx55Q6ZPL9 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms