Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm2446-201ENSMUST00000220144 772 ntBASIC4.49□□□□□ -1.69
Ddx58Q6Q899 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.49□□□□□ -1.69
Ddx58Q6Q899 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ddx58Q6Q899 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.49□□□□□ -1.69
Ddx58Q6Q899 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Ddx58Q6Q899 Gm336-201ENSMUST00000186376 1480 ntBASIC4.49□□□□□ -1.69
Ddx58Q6Q899 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.49□□□□□ -1.69
Ddx58Q6Q899 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ddx58Q6Q899 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm24544-201ENSMUST00000103862 110 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm13454-201ENSMUST00000118166 483 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm14899-201ENSMUST00000118673 548 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm12276-201ENSMUST00000121709 301 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm25666-201ENSMUST00000157702 107 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm26401-201ENSMUST00000158502 76 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm23568-201ENSMUST00000177960 92 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm24829-201ENSMUST00000179245 92 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm26960-201ENSMUST00000182263 412 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm29550-201ENSMUST00000185543 285 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm43582-201ENSMUST00000196149 343 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm43245-201ENSMUST00000197603 468 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm18672-201ENSMUST00000208035 270 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm21007-201ENSMUST00000221024 326 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm24490-201ENSMUST00000083803 98 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm25630-201ENSMUST00000084000 162 ntBASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ddx58Q6Q899 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm26384-201ENSMUST00000102183 110 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm22072-201ENSMUST00000116850 121 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm11913-201ENSMUST00000119094 336 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm12891-201ENSMUST00000119358 240 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm15177-201ENSMUST00000120491 577 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm24968-201ENSMUST00000179817 107 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm38088-201ENSMUST00000195829 241 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm45031-201ENSMUST00000206800 288 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm45420-201ENSMUST00000211243 425 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 AC120394.1-201ENSMUST00000217153 351 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Snord14e-201ENSMUST00000082857 90 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm10161-201ENSMUST00000091506 204 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ddx58Q6Q899 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.46□□□□□ -1.69
Ddx58Q6Q899 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.46□□□□□ -1.69
Ddx58Q6Q899 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.46□□□□□ -1.69
Ddx58Q6Q899 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.46□□□□□ -1.69
Ddx58Q6Q899 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.46□□□□□ -1.69
Ddx58Q6Q899 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Ddx58Q6Q899 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx58Q6Q899 BC051076-202ENSMUST00000199477 2868 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm14815-201ENSMUST00000120060 488 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm16274-201ENSMUST00000139251 592 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.46□□□□□ -1.7
Ddx58Q6Q899 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm22390-201ENSMUST00000157588 325 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm27592-201ENSMUST00000157729 126 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm22174-201ENSMUST00000175050 125 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm22692-201ENSMUST00000175055 125 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm27634-201ENSMUST00000175060 126 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm26460-201ENSMUST00000175061 126 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm22460-201ENSMUST00000175269 124 ntBASIC4.46□□□□□ -1.7
Ddx58Q6Q899 Gm25535-201ENSMUST00000175364 125 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms