Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm14215-201ENSMUST00000120578 221 ntBASIC1.93□□□□□ -2.1
Col7a1Q63870 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Col7a1Q63870 AC160134.1-201ENSMUST00000213450 551 ntBASIC1.93□□□□□ -2.1
Col7a1Q63870 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Zmym2-202ENSMUST00000223669 1281 ntBASIC1.93□□□□□ -2.1
Col7a1Q63870 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.93□□□□□ -2.1
Col7a1Q63870 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 AC153899.1-201ENSMUST00000214092 1117 ntBASIC1.93□□□□□ -2.1
Col7a1Q63870 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.93□□□□□ -2.1
Col7a1Q63870 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Col7a1Q63870 Gm23264-201ENSMUST00000083372 107 ntBASIC1.93□□□□□ -2.1
Col7a1Q63870 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col7a1Q63870 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Mir711-201ENSMUST00000102188 82 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm26082-201ENSMUST00000104070 127 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm16111-201ENSMUST00000162128 285 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm27315-201ENSMUST00000183977 154 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm22723-201ENSMUST00000083820 129 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm5653-201ENSMUST00000223393 1337 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm14971-201ENSMUST00000117980 663 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm26652-202ENSMUST00000181672 475 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm37837-201ENSMUST00000191743 604 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm43911-201ENSMUST00000203097 76 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Gm45678-201ENSMUST00000210509 295 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 AC160016.1-201ENSMUST00000215589 448 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 AC124399.1-201ENSMUST00000218334 590 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 AC162376.1-201ENSMUST00000220120 435 ntBASIC1.92□□□□□ -2.1
Col7a1Q63870 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.92□□□□□ -2.1
Col7a1Q63870 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Col7a1Q63870 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm23824-201ENSMUST00000158741 276 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 AC115735.1-201ENSMUST00000226633 350 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Rny1-201ENSMUST00000083767 112 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Col7a1Q63870 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col7a1Q63870 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm12550-201ENSMUST00000118478 329 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm26345-201ENSMUST00000157534 120 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm22716-201ENSMUST00000177596 107 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC1.91□□□□□ -2.1
Col7a1Q63870 AC099612.2-201ENSMUST00000226824 721 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm26449-201ENSMUST00000082452 104 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm14429-201ENSMUST00000121881 2024 ntBASIC1.91□□□□□ -2.1
Col7a1Q63870 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Col7a1Q63870 Gm15760-201ENSMUST00000119553 283 ntBASIC1.9□□□□□ -2.1
Col7a1Q63870 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.9□□□□□ -2.1
Col7a1Q63870 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC1.9□□□□□ -2.1
Col7a1Q63870 Gm45588-201ENSMUST00000211213 630 ntBASIC1.9□□□□□ -2.1
Col7a1Q63870 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.9□□□□□ -2.1
Col7a1Q63870 Gm20304-201ENSMUST00000218168 444 ntBASIC1.9□□□□□ -2.1
Col7a1Q63870 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
Col7a1Q63870 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Col7a1Q63870 CT025577.1-201ENSMUST00000220862 2846 ntBASIC1.9□□□□□ -2.1
Col7a1Q63870 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
Col7a1Q63870 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm649-201ENSMUST00000117284 1054 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm18560-201ENSMUST00000173463 1123 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm28920-201ENSMUST00000189957 699 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Igkv15-97-201ENSMUST00000197637 339 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm29884-201ENSMUST00000218403 453 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC1.9□□□□□ -2.11
Col7a1Q63870 AC139294.1-201ENSMUST00000226708 571 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm44715-201ENSMUST00000209049 3839 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm22003-201ENSMUST00000101885 107 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm24715-201ENSMUST00000102377 95 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm24342-201ENSMUST00000103907 104 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm16232-201ENSMUST00000162856 167 ntBASIC1.9□□□□□ -2.11
Col7a1Q63870 Gm24540-201ENSMUST00000177627 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms