Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CtcfQ61164 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CtcfQ61164 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm26002-201ENSMUST00000101915 107 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm22936-201ENSMUST00000103955 126 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm22771-201ENSMUST00000104449 91 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm11874-201ENSMUST00000117437 130 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm6664-201ENSMUST00000119138 468 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm15452-201ENSMUST00000119877 240 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 n-R5s207-201ENSMUST00000122497 118 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm22988-201ENSMUST00000122759 144 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm22792-201ENSMUST00000157225 133 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm24976-201ENSMUST00000158972 135 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm6625-201ENSMUST00000177870 272 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm5527-201ENSMUST00000179821 642 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm27919-201ENSMUST00000185163 107 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm29389-201ENSMUST00000191562 352 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC4.1□□□□□ -1.75
CtcfQ61164 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm43155-201ENSMUST00000202661 494 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm44703-201ENSMUST00000205724 248 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm44887-201ENSMUST00000208980 178 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcfQ61164 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcfQ61164 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcfQ61164 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcfQ61164 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CtcfQ61164 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.1□□□□□ -1.75
CtcfQ61164 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CtcfQ61164 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CtcfQ61164 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm24982-201ENSMUST00000104456 132 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm25560-201ENSMUST00000104606 176 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm13614-201ENSMUST00000117306 503 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm14880-201ENSMUST00000117581 292 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm13650-201ENSMUST00000117729 433 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm14753-201ENSMUST00000118503 246 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm6591-201ENSMUST00000121063 434 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm14564-201ENSMUST00000122159 294 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm12368-201ENSMUST00000122251 434 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm24059-201ENSMUST00000157493 312 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm24438-201ENSMUST00000157893 115 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm25436-201ENSMUST00000158275 145 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm24666-201ENSMUST00000158937 167 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcfQ61164 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm21754-201ENSMUST00000177550 479 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm28343-201ENSMUST00000185386 112 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm29365-201ENSMUST00000189461 699 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm38109-201ENSMUST00000195386 181 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm43487-201ENSMUST00000200331 1031 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm44990-201ENSMUST00000203922 217 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm45530-201ENSMUST00000211658 225 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm5548-201ENSMUST00000055878 397 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcfQ61164 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcfQ61164 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CtcfQ61164 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm24611-201ENSMUST00000083272 107 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms