Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Usf1Q61069 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Usf1Q61069 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Usf1Q61069 Gm21286-201ENSMUST00000098035 545 ntBASIC3.01□□□□□ -1.93
Usf1Q61069 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Usf1Q61069 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Usf1Q61069 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Usf1Q61069 Gm45263-201ENSMUST00000210377 1375 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm37848-201ENSMUST00000195288 3103 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm44708-201ENSMUST00000205580 2237 ntBASIC3□□□□□ -1.93
Usf1Q61069 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Usf1Q61069 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3□□□□□ -1.93
Usf1Q61069 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Usf1Q61069 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3□□□□□ -1.93
Usf1Q61069 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3□□□□□ -1.93
Usf1Q61069 Gm38699-201ENSMUST00000221301 1740 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm45540-201ENSMUST00000209271 3606 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm24340-201ENSMUST00000104208 97 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm11367-201ENSMUST00000117802 120 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm12739-201ENSMUST00000119769 382 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm15142-201ENSMUST00000121013 856 ntBASIC3□□□□□ -1.93
Usf1Q61069 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3□□□□□ -1.93
Usf1Q61069 Gm24958-201ENSMUST00000158009 97 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3□□□□□ -1.93
Usf1Q61069 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Usf1Q61069 Gm20542-201ENSMUST00000174582 372 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm18520-201ENSMUST00000174783 658 ntBASIC3□□□□□ -1.93
Usf1Q61069 Snord92-201ENSMUST00000175548 85 ntBASIC3□□□□□ -1.93
Usf1Q61069 Mir3470b-201ENSMUST00000175563 126 ntBASIC3□□□□□ -1.93
Usf1Q61069 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3□□□□□ -1.93
Usf1Q61069 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm7909-201ENSMUST00000182688 614 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm27308-201ENSMUST00000184807 233 ntBASIC3□□□□□ -1.93
Usf1Q61069 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3□□□□□ -1.93
Usf1Q61069 Gm7652-201ENSMUST00000200440 1151 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm45063-201ENSMUST00000203726 472 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm43954-201ENSMUST00000204634 544 ntBASIC3□□□□□ -1.93
Usf1Q61069 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3□□□□□ -1.93
Usf1Q61069 Gm44954-201ENSMUST00000208513 227 ntBASIC3□□□□□ -1.93
Usf1Q61069 AC140254.1-201ENSMUST00000220063 331 ntBASIC3□□□□□ -1.93
Usf1Q61069 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3□□□□□ -1.93
Usf1Q61069 AC118639.1-204ENSMUST00000226401 694 ntBASIC3□□□□□ -1.93
Usf1Q61069 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3□□□□□ -1.93
Usf1Q61069 Gm22979-201ENSMUST00000082609 159 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm10212-201ENSMUST00000087884 324 ntBASIC3□□□□□ -1.93
Usf1Q61069 Gm42534-201ENSMUST00000196063 1754 ntBASIC3□□□□□ -1.93
Usf1Q61069 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Usf1Q61069 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.99□□□□□ -1.93
Usf1Q61069 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Usf1Q61069 Mir667-201ENSMUST00000102441 92 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
Usf1Q61069 Gm13761-201ENSMUST00000117238 807 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm14627-201ENSMUST00000118931 567 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm14768-201ENSMUST00000122126 678 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm22960-201ENSMUST00000122517 104 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm24840-201ENSMUST00000122603 147 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm7346-201ENSMUST00000169661 476 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm27942-201ENSMUST00000184669 101 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm7837-201ENSMUST00000190873 412 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm37290-201ENSMUST00000195775 339 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Mir7118-201ENSMUST00000197760 61 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm43493-201ENSMUST00000199837 202 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm43415-201ENSMUST00000201934 750 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.99□□□□□ -1.93
Usf1Q61069 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.99□□□□□ -1.93
Usf1Q61069 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm30534-201ENSMUST00000217928 207 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.99□□□□□ -1.93
Usf1Q61069 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Usf1Q61069 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Usf1Q61069 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Usf1Q61069 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Usf1Q61069 Gm22304-201ENSMUST00000082688 129 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Usf1Q61069 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.99□□□□□ -1.93
Usf1Q61069 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Usf1Q61069 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Usf1Q61069 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Usf1Q61069 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Usf1Q61069 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Usf1Q61069 Gm8569-201ENSMUST00000117630 647 ntBASIC2.98□□□□□ -1.93
Usf1Q61069 Gm13087-201ENSMUST00000118298 256 ntBASIC2.98□□□□□ -1.93
Usf1Q61069 Gm2003-201ENSMUST00000118537 636 ntBASIC2.98□□□□□ -1.93
Usf1Q61069 Gm11830-201ENSMUST00000120175 561 ntBASIC2.98□□□□□ -1.93
Usf1Q61069 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.98□□□□□ -1.93
Usf1Q61069 Gm13692-201ENSMUST00000120774 371 ntBASIC2.98□□□□□ -1.93
Usf1Q61069 Gm11321-201ENSMUST00000121257 902 ntBASIC2.98□□□□□ -1.93
Usf1Q61069 Gm15157-201ENSMUST00000121852 702 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms