Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm15936-201ENSMUST00000118706 460 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm12721-201ENSMUST00000120621 268 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm13430-201ENSMUST00000121366 288 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm16510-201ENSMUST00000153501 249 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm25824-201ENSMUST00000157092 121 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm24787-201ENSMUST00000157380 123 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm26411-201ENSMUST00000157668 107 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm16232-201ENSMUST00000162856 167 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm37878-201ENSMUST00000192108 387 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm32340-201ENSMUST00000192883 259 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm8823-201ENSMUST00000193158 433 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm37088-201ENSMUST00000193887 406 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 AC153800.1-201ENSMUST00000219212 365 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 CT030182.3-201ENSMUST00000225986 582 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm26458-201ENSMUST00000082832 128 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm24698-201ENSMUST00000083883 130 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 AC124561.2-201ENSMUST00000226657 1973 ntBASIC1.67□□□□□ -2.14
Trav3-1Q5R1I8 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm25726-201ENSMUST00000104529 129 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm14647-201ENSMUST00000119392 680 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm13541-201ENSMUST00000119519 283 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm15760-201ENSMUST00000119553 283 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm12994-201ENSMUST00000119601 447 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Amd-ps1-201ENSMUST00000120127 994 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm13443-201ENSMUST00000120770 555 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm8988-201ENSMUST00000155015 1240 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm25860-201ENSMUST00000158252 126 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Mir3110-201ENSMUST00000175053 80 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm8649-201ENSMUST00000181799 233 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm17916-202ENSMUST00000187634 1187 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Trav3-1Q5R1I8 Gm37236-201ENSMUST00000193670 3249 ntBASIC1.65□□□□□ -2.14
Trav3-1Q5R1I8 Gm12328-201ENSMUST00000118611 197 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm14748-201ENSMUST00000119819 411 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm14623-201ENSMUST00000121398 603 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm22037-201ENSMUST00000157280 296 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm23312-201ENSMUST00000158774 102 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm10357-201ENSMUST00000159886 264 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm16290-201ENSMUST00000161175 474 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm16289-201ENSMUST00000162079 183 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm22917-201ENSMUST00000180116 110 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm11394-201ENSMUST00000181421 517 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Mir6995-201ENSMUST00000183658 71 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Ighv5-5-201ENSMUST00000193826 329 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm43096-201ENSMUST00000196173 421 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm43370-201ENSMUST00000196437 284 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm25203-202ENSMUST00000200458 216 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm45049-201ENSMUST00000207586 591 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm18000-201ENSMUST00000212153 800 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm7588-201ENSMUST00000216866 571 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 AC139638.1-201ENSMUST00000218027 364 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 AC164567.4-201ENSMUST00000219708 483 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 AC160114.1-201ENSMUST00000221930 365 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm18338-201ENSMUST00000222381 560 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 AC166369.1-201ENSMUST00000228126 351 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms