Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm43415-201ENSMUST00000201934 750 ntBASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.89□□□□□ -1.79
Ccdc88bQ4QRL3 Gm15244-201ENSMUST00000121122 130 ntBASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr203-201ENSMUST00000089305 924 ntBASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc88bQ4QRL3 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm27527-201ENSMUST00000183903 99 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm28399-201ENSMUST00000186221 318 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm28572-201ENSMUST00000187444 318 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm29524-201ENSMUST00000190819 699 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Trbv27-201ENSMUST00000193711 277 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm44609-201ENSMUST00000207157 460 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm5175-202ENSMUST00000219699 529 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 AF357341-201ENSMUST00000083088 75 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc88bQ4QRL3 Gm12213-201ENSMUST00000119924 353 ntBASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Gm26396-201ENSMUST00000104093 132 ntBASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Gm15267-201ENSMUST00000120888 464 ntBASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Snora33-201ENSMUST00000093556 129 ntBASIC3.86□□□□□ -1.79
Ccdc88bQ4QRL3 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 Gm15162-201ENSMUST00000119325 283 ntBASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 Gm22192-201ENSMUST00000175128 85 ntBASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 Gm27470-201ENSMUST00000184070 210 ntBASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 Gm43975-201ENSMUST00000203023 481 ntBASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 Gm25632-201ENSMUST00000083112 85 ntBASIC3.85□□□□□ -1.79
Ccdc88bQ4QRL3 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc88bQ4QRL3 Gm43473-201ENSMUST00000200442 5997 ntBASIC3.84□□□□□ -1.79
Ccdc88bQ4QRL3 Gm14589-201ENSMUST00000121640 727 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 n-R5s159-201ENSMUST00000122681 120 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Gm24771-201ENSMUST00000158508 137 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Gm45654-201ENSMUST00000210980 123 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Gm36247-201ENSMUST00000211834 285 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.84□□□□□ -1.8
Ccdc88bQ4QRL3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Gm26077-201ENSMUST00000104064 123 ntBASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Gm13314-201ENSMUST00000118742 335 ntBASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Gm23714-201ENSMUST00000179259 105 ntBASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Gm43626-201ENSMUST00000198575 162 ntBASIC3.83□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Gm43669-201ENSMUST00000198229 436 ntBASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Gm43587-201ENSMUST00000199590 204 ntBASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88bQ4QRL3 Gm14823-201ENSMUST00000117698 238 ntBASIC3.81□□□□□ -1.8
Ccdc88bQ4QRL3 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc88bQ4QRL3 AL928567.1-201ENSMUST00000197891 138 ntBASIC3.81□□□□□ -1.8
Ccdc88bQ4QRL3 Gm43901-201ENSMUST00000203247 453 ntBASIC3.81□□□□□ -1.8
Ccdc88bQ4QRL3 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc88bQ4QRL3 Gm15399-201ENSMUST00000118055 724 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms