Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm13167-201ENSMUST00000118554 578 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm12803-201ENSMUST00000118907 821 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm12317-201ENSMUST00000122307 319 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm26271-201ENSMUST00000158349 104 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm18417-201ENSMUST00000176564 648 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm28560-201ENSMUST00000186091 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm18448-201ENSMUST00000186286 599 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm28334-201ENSMUST00000186653 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm28495-201ENSMUST00000188452 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm28232-201ENSMUST00000188683 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm28481-201ENSMUST00000189231 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm29059-201ENSMUST00000191534 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm37765-201ENSMUST00000192395 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm37343-201ENSMUST00000192542 111 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm37237-201ENSMUST00000192893 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm36968-201ENSMUST00000193737 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm38290-201ENSMUST00000195238 315 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm43407-201ENSMUST00000199816 317 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm44254-201ENSMUST00000204184 322 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm24622-201ENSMUST00000082619 162 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 AF357341-201ENSMUST00000083088 75 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm23850-201ENSMUST00000083830 169 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.22□□□□□ -1.89
Trim40Q3UWA4 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
Trim40Q3UWA4 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm14518-201ENSMUST00000117351 542 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm13567-201ENSMUST00000118026 247 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm14669-201ENSMUST00000118841 250 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm15659-201ENSMUST00000118881 341 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm15231-201ENSMUST00000119174 447 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm12935-201ENSMUST00000119352 246 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm14301-201ENSMUST00000120181 324 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm12639-201ENSMUST00000121400 493 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm24517-201ENSMUST00000122560 107 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm15733-201ENSMUST00000132957 242 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm16290-201ENSMUST00000161175 474 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm25874-201ENSMUST00000178030 79 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm28030-201ENSMUST00000184987 138 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm37866-201ENSMUST00000191950 696 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm7449-201ENSMUST00000194393 663 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm17781-201ENSMUST00000195232 649 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm43043-201ENSMUST00000196579 412 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm45658-201ENSMUST00000209197 580 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 AC158525.1-201ENSMUST00000223806 576 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm25205-201ENSMUST00000082841 103 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm25404-201ENSMUST00000082970 107 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm24921-201ENSMUST00000083024 107 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm24446-201ENSMUST00000083982 156 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.21□□□□□ -1.9
Trim40Q3UWA4 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm26145-201ENSMUST00000104476 127 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms