Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm38329-201ENSMUST00000193473 427 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 LOC667541-201ENSMUST00000223408 278 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Upf3aQ3ULJ3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm23911-201ENSMUST00000104596 134 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm6429-201ENSMUST00000117144 475 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm21809-201ENSMUST00000178495 468 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm20574-201ENSMUST00000182867 917 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.2□□□□□ -1.9
Upf3aQ3ULJ3 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Mir592-201ENSMUST00000102113 96 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm22019-201ENSMUST00000104359 96 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm13228-201ENSMUST00000118937 634 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm22141-201ENSMUST00000157403 277 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Mir3106-201ENSMUST00000175401 82 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm25360-201ENSMUST00000178786 191 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm7837-201ENSMUST00000190873 412 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm9373-201ENSMUST00000208724 599 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm19232-201ENSMUST00000211621 652 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Upf3aQ3ULJ3 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Mir1195-201ENSMUST00000116818 98 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm23583-201ENSMUST00000158533 289 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Mir3092-201ENSMUST00000174954 96 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm20776-201ENSMUST00000189940 700 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm37002-201ENSMUST00000194560 373 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm43198-201ENSMUST00000200927 326 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm44526-201ENSMUST00000204664 121 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm44966-201ENSMUST00000208096 157 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3aQ3ULJ3 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.17□□□□□ -1.9
Upf3aQ3ULJ3 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Upf3aQ3ULJ3 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Upf3aQ3ULJ3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms