Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trafd1Q3UDK1 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm24890-201ENSMUST00000104389 102 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm23609-201ENSMUST00000104542 127 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm14142-201ENSMUST00000117833 296 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm9440-201ENSMUST00000119667 539 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm25979-201ENSMUST00000157177 138 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm23034-201ENSMUST00000158001 147 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm2930-201ENSMUST00000170403 474 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm6501-201ENSMUST00000187178 916 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm44634-201ENSMUST00000206119 152 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm9375-201ENSMUST00000208899 903 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm24928-201ENSMUST00000083399 107 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm25897-201ENSMUST00000083709 107 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm22578-201ENSMUST00000083730 107 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Mir463-201ENSMUST00000093570 75 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Trafd1Q3UDK1 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm22143-201ENSMUST00000157401 203 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm3221-201ENSMUST00000164869 440 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm17655-201ENSMUST00000167969 255 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm4540-201ENSMUST00000170669 429 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm27342-201ENSMUST00000183530 109 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Mir8096-201ENSMUST00000184526 127 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm42958-201ENSMUST00000197595 318 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm3010-201ENSMUST00000198805 448 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm43217-201ENSMUST00000199513 367 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm42857-201ENSMUST00000200823 339 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm43004-201ENSMUST00000201872 703 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm7946-201ENSMUST00000203326 958 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm18729-201ENSMUST00000217230 621 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 CT025538.2-201ENSMUST00000226083 772 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm22245-201ENSMUST00000082479 103 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm23297-201ENSMUST00000083184 127 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Trafd1Q3UDK1 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm14007-201ENSMUST00000118288 210 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm12383-201ENSMUST00000120628 760 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm14577-201ENSMUST00000121134 256 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms