Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm6112-201ENSMUST00000208037 629 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm24610-201ENSMUST00000083270 109 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Ddb1Q3U1J4 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm15026-201ENSMUST00000119219 458 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm11522-201ENSMUST00000120533 176 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm6058-201ENSMUST00000154261 399 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm22378-201ENSMUST00000157481 111 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm21729-201ENSMUST00000180058 664 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm21853-201ENSMUST00000180071 664 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm28666-201ENSMUST00000186649 274 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm29495-201ENSMUST00000189319 664 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm2189-201ENSMUST00000201419 429 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm43975-201ENSMUST00000203023 481 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm44879-201ENSMUST00000207007 503 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm25205-201ENSMUST00000082841 103 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.94□□□□□ -1.62
Ddb1Q3U1J4 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm14624-201ENSMUST00000117746 192 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm15166-201ENSMUST00000120790 385 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm13356-201ENSMUST00000121678 335 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm24724-201ENSMUST00000158230 107 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm25438-201ENSMUST00000158281 110 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Mir5101-201ENSMUST00000175181 83 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm28010-201ENSMUST00000179485 126 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm26988-201ENSMUST00000183296 945 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm28625-201ENSMUST00000188309 205 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Trbv8-201ENSMUST00000194020 285 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm38109-201ENSMUST00000195386 181 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm30155-201ENSMUST00000223458 339 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ddb1Q3U1J4 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Gm23609-201ENSMUST00000104542 127 ntBASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Gm12125-201ENSMUST00000117261 736 ntBASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Gm14669-201ENSMUST00000118841 250 ntBASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Gm14815-201ENSMUST00000120060 488 ntBASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Mup-ps22-201ENSMUST00000121611 243 ntBASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC4.92□□□□□ -1.62
Ddb1Q3U1J4 Gm24550-201ENSMUST00000158648 279 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms