Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Col9a1Q05722 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col9a1Q05722 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm45876-201ENSMUST00000212698 2709 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col9a1Q05722 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col9a1Q05722 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm22936-201ENSMUST00000103955 126 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm25168-201ENSMUST00000104189 132 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm13321-201ENSMUST00000117101 400 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm15760-201ENSMUST00000119553 283 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm13419-201ENSMUST00000121711 271 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm14564-201ENSMUST00000122159 294 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm23781-201ENSMUST00000157940 308 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm24666-201ENSMUST00000158937 167 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm5258-201ENSMUST00000165437 327 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm22699-201ENSMUST00000175376 105 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Mir5710-201ENSMUST00000176884 69 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm29574-201ENSMUST00000186226 696 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col9a1Q05722 Gm5318-201ENSMUST00000205249 406 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Mir384-201ENSMUST00000083565 88 ntBASIC5.65□□□□□ -1.5
Col9a1Q05722 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col9a1Q05722 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col9a1Q05722 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col9a1Q05722 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col9a1Q05722 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Col9a1Q05722 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.65□□□□□ -1.51
Col9a1Q05722 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col9a1Q05722 Cmah-208ENSMUST00000224819 9482 ntBASIC5.65□□□□□ -1.51
Col9a1Q05722 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
Col9a1Q05722 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.65□□□□□ -1.51
Col9a1Q05722 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col9a1Q05722 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Mir147-201ENSMUST00000102354 79 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm11874-201ENSMUST00000117437 130 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm12850-201ENSMUST00000119210 436 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm14922-201ENSMUST00000121131 163 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.64□□□□□ -1.51
Col9a1Q05722 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Mir6335-201ENSMUST00000184081 98 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Trbv9-201ENSMUST00000194494 290 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm43078-201ENSMUST00000197222 168 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm43978-201ENSMUST00000203491 451 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm19244-201ENSMUST00000204340 253 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm17811-201ENSMUST00000206193 387 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm5027-201ENSMUST00000206700 375 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm24706-201ENSMUST00000082806 137 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.64□□□□□ -1.51
Col9a1Q05722 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col9a1Q05722 Gm43300-201ENSMUST00000198540 2043 ntBASIC5.64□□□□□ -1.51
Col9a1Q05722 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col9a1Q05722 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col9a1Q05722 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col9a1Q05722 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.63□□□□□ -1.51
Col9a1Q05722 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col9a1Q05722 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.63□□□□□ -1.51
Col9a1Q05722 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col9a1Q05722 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.63□□□□□ -1.51
Col9a1Q05722 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col9a1Q05722 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col9a1Q05722 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col9a1Q05722 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col9a1Q05722 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.63□□□□□ -1.51
Col9a1Q05722 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col9a1Q05722 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms