Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm21916-201ENSMUST00000178771 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21801-201ENSMUST00000178865 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21633-201ENSMUST00000178941 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21821-201ENSMUST00000179646 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21588-201ENSMUST00000180074 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21780-201ENSMUST00000180128 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21572-201ENSMUST00000180134 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21529-201ENSMUST00000180175 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm29370-202ENSMUST00000187476 499 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm42570-201ENSMUST00000195937 292 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm36382-201ENSMUST00000198892 541 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm29793-201ENSMUST00000202874 460 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm45678-201ENSMUST00000210509 295 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm22293-201ENSMUST00000083314 109 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm22829-201ENSMUST00000083771 106 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm24124-201ENSMUST00000104103 132 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm13046-201ENSMUST00000117391 501 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm12486-201ENSMUST00000120887 541 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm12413-201ENSMUST00000121508 312 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm13345-201ENSMUST00000121928 228 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm23167-201ENSMUST00000157155 103 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm23901-201ENSMUST00000157570 107 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm23855-201ENSMUST00000158377 135 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Mir3964-201ENSMUST00000174898 74 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 Mir6344-201ENSMUST00000183462 104 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm29192-201ENSMUST00000190942 377 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.11□□□□□ -1.75
Col8a1Q00780 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm21937-201ENSMUST00000222825 218 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.11□□□□□ -1.75
Col8a1Q00780 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col8a1Q00780 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col8a1Q00780 Synpr-207ENSMUST00000223583 3362 ntBASIC4.11□□□□□ -1.75
Col8a1Q00780 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Col8a1Q00780 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col8a1Q00780 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col8a1Q00780 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm24403-201ENSMUST00000104616 130 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm13250-201ENSMUST00000117209 753 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm13932-201ENSMUST00000120873 610 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm11582-201ENSMUST00000121041 236 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm14845-201ENSMUST00000121259 306 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm25923-201ENSMUST00000158312 138 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm23704-201ENSMUST00000158844 340 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm3027-201ENSMUST00000167579 451 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm3104-201ENSMUST00000171004 473 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms