Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm22219-201ENSMUST00000157562 319 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Gm2862-201ENSMUST00000161524 328 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdh11P55288 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdh11P55288 Mir713-201ENSMUST00000178651 108 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Gm24520-201ENSMUST00000179510 110 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Gm31123-201ENSMUST00000192094 666 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Gm7946-201ENSMUST00000203326 958 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.38□□□□□ -1.87
Cdh11P55288 Gm44611-201ENSMUST00000207507 355 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdh11P55288 Gm7119-201ENSMUST00000221345 695 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 AC164297.5-201ENSMUST00000224365 198 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdh11P55288 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdh11P55288 Gm10038-201ENSMUST00000077233 441 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Gm25481-201ENSMUST00000083221 158 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cdh11P55288 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdh11P55288 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdh11P55288 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdh11P55288 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cdh11P55288 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdh11P55288 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.38□□□□□ -1.87
Cdh11P55288 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Cdh11P55288 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdh11P55288 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Mir599-201ENSMUST00000102378 88 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm23133-201ENSMUST00000104255 135 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm14981-201ENSMUST00000117325 943 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm13650-201ENSMUST00000117729 433 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm12509-201ENSMUST00000118033 609 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm14119-201ENSMUST00000119511 235 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm15030-201ENSMUST00000119804 484 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdh11P55288 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm11321-201ENSMUST00000121257 902 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm22236-201ENSMUST00000157093 106 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm23312-201ENSMUST00000158774 102 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm25451-201ENSMUST00000177832 121 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm23568-201ENSMUST00000177960 92 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm24829-201ENSMUST00000179245 92 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm11392-201ENSMUST00000181419 710 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm29045-201ENSMUST00000187278 698 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm28654-201ENSMUST00000189801 379 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm5829-201ENSMUST00000191383 351 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm38356-201ENSMUST00000194313 408 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm43556-201ENSMUST00000196186 681 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdh11P55288 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.37□□□□□ -1.87
Cdh11P55288 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm6240-201ENSMUST00000208014 473 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm6929-201ENSMUST00000210930 468 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.37□□□□□ -1.87
Cdh11P55288 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.37□□□□□ -1.87
Cdh11P55288 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cdh11P55288 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cdh11P55288 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Cdh11P55288 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cdh11P55288 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.36□□□□□ -1.87
Cdh11P55288 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cdh11P55288 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.36□□□□□ -1.87
Cdh11P55288 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdh11P55288 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.36□□□□□ -1.87
Cdh11P55288 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.36□□□□□ -1.87
Cdh11P55288 Gm25765-201ENSMUST00000104100 132 ntBASIC3.36□□□□□ -1.87
Cdh11P55288 Gm25833-201ENSMUST00000104137 133 ntBASIC3.36□□□□□ -1.87
Cdh11P55288 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdh11P55288 Gm15195-201ENSMUST00000118775 263 ntBASIC3.36□□□□□ -1.87
Cdh11P55288 Gm11357-201ENSMUST00000119758 954 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms