Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC3.56□□□□□ -1.84
Cux1P53564 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cux1P53564 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Gm12515-201ENSMUST00000120116 361 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.56□□□□□ -1.84
Cux1P53564 Mir3569-201ENSMUST00000185080 58 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Gm28974-201ENSMUST00000187893 231 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cux1P53564 Gm18327-201ENSMUST00000202426 830 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Gm19252-201ENSMUST00000204705 305 ntBASIC3.56□□□□□ -1.84
Cux1P53564 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.56□□□□□ -1.84
Cux1P53564 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.56□□□□□ -1.84
Cux1P53564 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Cux1P53564 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cux1P53564 Mir758-201ENSMUST00000103260 81 ntBASIC3.55□□□□□ -1.84
Cux1P53564 Gm13755-201ENSMUST00000118509 305 ntBASIC3.55□□□□□ -1.84
Cux1P53564 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.55□□□□□ -1.84
Cux1P53564 n-R5s159-201ENSMUST00000122681 120 ntBASIC3.55□□□□□ -1.84
Cux1P53564 Gm25806-201ENSMUST00000122782 122 ntBASIC3.55□□□□□ -1.84
Cux1P53564 Gm26354-201ENSMUST00000158221 129 ntBASIC3.55□□□□□ -1.84
Cux1P53564 Gm27443-201ENSMUST00000184660 98 ntBASIC3.55□□□□□ -1.84
Cux1P53564 Gm21006-201ENSMUST00000196930 667 ntBASIC3.55□□□□□ -1.84
Cux1P53564 Gm43669-201ENSMUST00000198229 436 ntBASIC3.55□□□□□ -1.84
Cux1P53564 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.55□□□□□ -1.84
Cux1P53564 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.55□□□□□ -1.84
Cux1P53564 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Cux1P53564 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Cux1P53564 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cux1P53564 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.54□□□□□ -1.84
Cux1P53564 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cux1P53564 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Cux1P53564 Gm19427-201ENSMUST00000183619 208 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm37989-201ENSMUST00000195202 803 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm43440-201ENSMUST00000201957 729 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm18193-201ENSMUST00000210017 772 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC3.54□□□□□ -1.84
Cux1P53564 Gm5655-201ENSMUST00000221078 901 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm24010-201ENSMUST00000157731 282 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm23223-201ENSMUST00000158119 127 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm29556-201ENSMUST00000187591 696 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Gm43804-201ENSMUST00000198280 456 ntBASIC3.54□□□□□ -1.84
Cux1P53564 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.54□□□□□ -1.84
Cux1P53564 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cux1P53564 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.54□□□□□ -1.84
Cux1P53564 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cux1P53564 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cux1P53564 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cux1P53564 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.53□□□□□ -1.84
Cux1P53564 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cux1P53564 Snora36b-201ENSMUST00000104383 132 ntBASIC3.53□□□□□ -1.84
Cux1P53564 Gm13439-201ENSMUST00000117541 409 ntBASIC3.53□□□□□ -1.84
Cux1P53564 Gm20542-201ENSMUST00000174582 372 ntBASIC3.53□□□□□ -1.84
Cux1P53564 Gm27991-201ENSMUST00000184804 137 ntBASIC3.53□□□□□ -1.84
Cux1P53564 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Cux1P53564 Gm45240-201ENSMUST00000211437 674 ntBASIC3.53□□□□□ -1.84
Cux1P53564 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.53□□□□□ -1.84
Cux1P53564 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.53□□□□□ -1.84
Cux1P53564 Gm12213-201ENSMUST00000119924 353 ntBASIC3.52□□□□□ -1.85
Cux1P53564 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.52□□□□□ -1.85
Cux1P53564 Gm14804-201ENSMUST00000122322 508 ntBASIC3.52□□□□□ -1.85
Cux1P53564 Gm18453-201ENSMUST00000208000 626 ntBASIC3.52□□□□□ -1.85
Cux1P53564 Gm2544-201ENSMUST00000222702 756 ntBASIC3.52□□□□□ -1.85
Cux1P53564 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cux1P53564 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cux1P53564 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
Cux1P53564 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cux1P53564 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cux1P53564 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cux1P53564 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.51□□□□□ -1.85
Cux1P53564 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cux1P53564 Gm14607-201ENSMUST00000119119 491 ntBASIC3.51□□□□□ -1.85
Cux1P53564 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.51□□□□□ -1.85
Cux1P53564 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC3.51□□□□□ -1.85
Cux1P53564 Gm24177-201ENSMUST00000158927 131 ntBASIC3.51□□□□□ -1.85
Cux1P53564 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cux1P53564 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.51□□□□□ -1.85
Cux1P53564 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.51□□□□□ -1.85
Cux1P53564 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Cux1P53564 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cux1P53564 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cux1P53564 Gm12731-201ENSMUST00000120932 268 ntBASIC3.5□□□□□ -1.85
Cux1P53564 Gm23885-201ENSMUST00000122682 294 ntBASIC3.5□□□□□ -1.85
Cux1P53564 Gm16561-201ENSMUST00000163001 192 ntBASIC3.5□□□□□ -1.85
Cux1P53564 Gm17030-201ENSMUST00000167016 393 ntBASIC3.5□□□□□ -1.85
Cux1P53564 Gm27470-201ENSMUST00000184070 210 ntBASIC3.5□□□□□ -1.85
Cux1P53564 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.5□□□□□ -1.85
Cux1P53564 Gm43295-201ENSMUST00000201439 412 ntBASIC3.5□□□□□ -1.85
Cux1P53564 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.5□□□□□ -1.85
Cux1P53564 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Cux1P53564 Gm23424-201ENSMUST00000103889 110 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.49□□□□□ -1.85
Cux1P53564 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Cux1P53564 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Cux1P53564 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms