Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm5917-201ENSMUST00000217638 721 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Shmt1P50431 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Shmt1P50431 Gm23627-201ENSMUST00000082459 107 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm22502-201ENSMUST00000082488 107 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm24149-201ENSMUST00000082757 107 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm22508-201ENSMUST00000082772 110 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm23515-201ENSMUST00000082829 107 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm23096-201ENSMUST00000083447 107 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Mir19a-201ENSMUST00000083482 82 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Gm23851-201ENSMUST00000083831 103 ntBASIC4.48□□□□□ -1.69
Shmt1P50431 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Shmt1P50431 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Shmt1P50431 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Shmt1P50431 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Shmt1P50431 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Shmt1P50431 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Shmt1P50431 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Shmt1P50431 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Shmt1P50431 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Shmt1P50431 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Mir551b-201ENSMUST00000102165 98 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm15025-201ENSMUST00000118434 418 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm6797-201ENSMUST00000119440 512 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm14852-201ENSMUST00000120065 647 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm14736-201ENSMUST00000121470 336 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm24675-201ENSMUST00000158757 259 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm23473-201ENSMUST00000158883 116 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm26219-201ENSMUST00000175216 71 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Mir6382-201ENSMUST00000184055 110 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Mir6418-201ENSMUST00000185075 115 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm28299-201ENSMUST00000189908 339 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Trbv11-201ENSMUST00000194354 260 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm37743-201ENSMUST00000194645 376 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm19147-201ENSMUST00000199622 652 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm7948-201ENSMUST00000212607 844 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm22293-201ENSMUST00000083314 109 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Shmt1P50431 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.47□□□□□ -1.69
Shmt1P50431 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Shmt1P50431 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.47□□□□□ -1.69
Shmt1P50431 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Shmt1P50431 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.46□□□□□ -1.69
Shmt1P50431 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.46□□□□□ -1.69
Shmt1P50431 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Shmt1P50431 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Shmt1P50431 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Shmt1P50431 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Shmt1P50431 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Shmt1P50431 Gm22269-201ENSMUST00000104002 130 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm12311-201ENSMUST00000118803 374 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm13082-201ENSMUST00000118877 561 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm14240-201ENSMUST00000120353 546 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm14591-201ENSMUST00000120407 518 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Shmt1P50431 Gm25827-201ENSMUST00000157089 107 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm22216-201ENSMUST00000157557 114 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm24690-201ENSMUST00000157759 97 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm23554-201ENSMUST00000157818 110 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm22156-201ENSMUST00000158409 141 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm23179-201ENSMUST00000158693 304 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm22136-201ENSMUST00000158751 268 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm25243-201ENSMUST00000174912 207 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Shmt1P50431 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Shmt1P50431 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Shmt1P50431 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Shmt1P50431 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm37313-201ENSMUST00000191673 290 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm7449-201ENSMUST00000194393 663 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm37495-201ENSMUST00000194590 264 ntBASIC4.46□□□□□ -1.7
Shmt1P50431 Gm43804-201ENSMUST00000198280 456 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms