Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC124399.1-201ENSMUST00000218334 590 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm9309-201ENSMUST00000223537 546 ntBASIC4.01□□□□□ -1.77
Traf1P39428 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.01□□□□□ -1.77
Traf1P39428 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.01□□□□□ -1.77
Traf1P39428 CT025525.1-201ENSMUST00000226325 1054 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm25126-201ENSMUST00000083343 102 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Gm22739-201ENSMUST00000083437 160 ntBASIC4.01□□□□□ -1.77
Traf1P39428 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Traf1P39428 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Traf1P39428 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Traf1P39428 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Traf1P39428 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Traf1P39428 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Traf1P39428 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Traf1P39428 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Traf1P39428 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4□□□□□ -1.77
Traf1P39428 Gm42534-201ENSMUST00000196063 1754 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm6913-201ENSMUST00000100019 348 ntBASIC4□□□□□ -1.77
Traf1P39428 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4□□□□□ -1.77
Traf1P39428 Gm14570-201ENSMUST00000119444 391 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm12998-201ENSMUST00000122445 789 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4□□□□□ -1.77
Traf1P39428 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC4□□□□□ -1.77
Traf1P39428 Gm23034-201ENSMUST00000158001 147 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm16353-201ENSMUST00000159458 1223 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm3123-201ENSMUST00000163480 480 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm17117-201ENSMUST00000163665 299 ntBASIC4□□□□□ -1.77
Traf1P39428 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4□□□□□ -1.77
Traf1P39428 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Traf1P39428 Gm3454-201ENSMUST00000185571 412 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm28623-201ENSMUST00000187219 192 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm37817-201ENSMUST00000195276 434 ntBASIC4□□□□□ -1.77
Traf1P39428 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC4□□□□□ -1.77
Traf1P39428 Gm42958-201ENSMUST00000197595 318 ntBASIC4□□□□□ -1.77
Traf1P39428 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm19244-201ENSMUST00000204340 253 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm36776-201ENSMUST00000207006 203 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm45380-201ENSMUST00000210465 315 ntBASIC4□□□□□ -1.77
Traf1P39428 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Traf1P39428 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4□□□□□ -1.77
Traf1P39428 AC123618.1-201ENSMUST00000220174 360 ntBASIC4□□□□□ -1.77
Traf1P39428 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Traf1P39428 Snord35b-201ENSMUST00000082833 87 ntBASIC4□□□□□ -1.77
Traf1P39428 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
Traf1P39428 Gm14415-201ENSMUST00000118260 1578 ntBASIC4□□□□□ -1.77
Traf1P39428 Gm6982-201ENSMUST00000118752 1560 ntBASIC4□□□□□ -1.77
Traf1P39428 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Traf1P39428 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Traf1P39428 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Traf1P39428 Gm26145-201ENSMUST00000104476 127 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Gm13122-201ENSMUST00000118380 453 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Gm15037-201ENSMUST00000120358 259 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Gm22956-201ENSMUST00000122520 80 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Gm23183-201ENSMUST00000122595 323 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Gm25979-201ENSMUST00000157177 138 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Gm22034-201ENSMUST00000157283 134 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Traf1P39428 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Mir8118-201ENSMUST00000183962 129 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Mir6413-201ENSMUST00000184049 108 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Gm28069-201ENSMUST00000189926 214 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Gm44084-201ENSMUST00000203947 409 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Traf1P39428 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.99□□□□□ -1.77
Traf1P39428 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Traf1P39428 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Traf1P39428 Gm24533-201ENSMUST00000083138 196 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Traf1P39428 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.99□□□□□ -1.77
Traf1P39428 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.99□□□□□ -1.77
Traf1P39428 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.98□□□□□ -1.77
Traf1P39428 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Traf1P39428 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Traf1P39428 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Traf1P39428 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Traf1P39428 Gm15025-201ENSMUST00000118434 418 ntBASIC3.98□□□□□ -1.77
Traf1P39428 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.98□□□□□ -1.77
Traf1P39428 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.98□□□□□ -1.77
Traf1P39428 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.98□□□□□ -1.77
Traf1P39428 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.98□□□□□ -1.77
Traf1P39428 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.98□□□□□ -1.77
Traf1P39428 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.98□□□□□ -1.77
Traf1P39428 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.98□□□□□ -1.77
Traf1P39428 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.98□□□□□ -1.77
Traf1P39428 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.98□□□□□ -1.77
Traf1P39428 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.98□□□□□ -1.77
Traf1P39428 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.98□□□□□ -1.77
Traf1P39428 Mir193a-201ENSMUST00000083461 66 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms