Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Gm8757-201ENSMUST00000119660 372 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm13687-201ENSMUST00000119857 282 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm5060-201ENSMUST00000120072 599 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm15799-201ENSMUST00000120899 289 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.59□□□□□ -1.67
Lig1P37913 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC4.59□□□□□ -1.67
Lig1P37913 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Lig1P37913 Gm25748-201ENSMUST00000175487 70 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lig1P37913 Gm8649-201ENSMUST00000181799 233 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm10193-201ENSMUST00000188288 231 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lig1P37913 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.59□□□□□ -1.67
Lig1P37913 Gm9227-201ENSMUST00000194733 566 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.59□□□□□ -1.67
Lig1P37913 Gm19089-201ENSMUST00000197207 613 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm43541-201ENSMUST00000197208 581 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm8041-201ENSMUST00000199755 616 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm44726-201ENSMUST00000203427 217 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.59□□□□□ -1.67
Lig1P37913 AC073947.3-201ENSMUST00000215576 766 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm29884-201ENSMUST00000218403 453 ntBASIC4.59□□□□□ -1.67
Lig1P37913 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.59□□□□□ -1.67
Lig1P37913 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.59□□□□□ -1.67
Lig1P37913 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Lig1P37913 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Lig1P37913 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Lig1P37913 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lig1P37913 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lig1P37913 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Lig1P37913 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.59□□□□□ -1.67
Lig1P37913 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
Lig1P37913 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Lig1P37913 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Lig1P37913 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Lig1P37913 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Lig1P37913 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.58□□□□□ -1.68
Lig1P37913 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Lig1P37913 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lig1P37913 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Lig1P37913 Gm6565-201ENSMUST00000121217 438 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lig1P37913 Gm25706-201ENSMUST00000157828 247 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Gm23583-201ENSMUST00000158533 289 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Gm17159-201ENSMUST00000169043 482 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Gm10067-201ENSMUST00000179462 348 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Gm8392-201ENSMUST00000185647 835 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Lig1P37913 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lig1P37913 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.58□□□□□ -1.68
Lig1P37913 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.58□□□□□ -1.68
Lig1P37913 Gm4036-201ENSMUST00000220842 626 ntBASIC4.58□□□□□ -1.68
Lig1P37913 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.58□□□□□ -1.68
Lig1P37913 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lig1P37913 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lig1P37913 Gm24623-201ENSMUST00000082616 194 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Gm25859-201ENSMUST00000083710 91 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Gm6361-201ENSMUST00000091031 435 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.58□□□□□ -1.68
Lig1P37913 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.58□□□□□ -1.68
Lig1P37913 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lig1P37913 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Lig1P37913 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lig1P37913 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Lig1P37913 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Lig1P37913 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lig1P37913 Gm14669-201ENSMUST00000118841 250 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm14837-201ENSMUST00000119688 206 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm15014-201ENSMUST00000120742 258 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm14845-201ENSMUST00000121259 306 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.57□□□□□ -1.68
Lig1P37913 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Lig1P37913 Gm23540-201ENSMUST00000157543 164 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lig1P37913 Gm25194-201ENSMUST00000177987 79 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.57□□□□□ -1.68
Lig1P37913 Gm28500-201ENSMUST00000190286 151 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm36984-201ENSMUST00000192770 235 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm38329-201ENSMUST00000193473 427 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm42924-201ENSMUST00000197261 185 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm44818-201ENSMUST00000206608 358 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm34779-201ENSMUST00000210036 263 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Gm18488-201ENSMUST00000215082 364 ntBASIC4.57□□□□□ -1.68
Lig1P37913 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.57□□□□□ -1.68
Lig1P37913 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.57□□□□□ -1.68
Lig1P37913 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.57□□□□□ -1.68
Lig1P37913 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.57□□□□□ -1.68
Lig1P37913 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.57□□□□□ -1.68
Lig1P37913 Snord21-201ENSMUST00000082519 94 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms