Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm14129-201ENSMUST00000122436 291 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm22073-201ENSMUST00000122668 189 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm25806-201ENSMUST00000122782 122 ntBASIC4.31□□□□□ -1.72
LdlrP35951 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LdlrP35951 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LdlrP35951 Gm24745-201ENSMUST00000157840 85 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm24857-201ENSMUST00000158061 310 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.31□□□□□ -1.72
LdlrP35951 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LdlrP35951 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LdlrP35951 Gm26426-201ENSMUST00000177866 123 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm23141-201ENSMUST00000178682 94 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm8807-201ENSMUST00000179328 492 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm26060-201ENSMUST00000180094 123 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Mir6382-201ENSMUST00000184055 110 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm27190-201ENSMUST00000184890 542 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LdlrP35951 Gm42830-201ENSMUST00000196642 313 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm45173-201ENSMUST00000206819 305 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm44650-201ENSMUST00000206929 194 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm8785-201ENSMUST00000220259 487 ntBASIC4.31□□□□□ -1.72
LdlrP35951 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.31□□□□□ -1.72
LdlrP35951 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LdlrP35951 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LdlrP35951 Gm25793-201ENSMUST00000083287 107 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Mir19a-201ENSMUST00000083482 82 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm24764-201ENSMUST00000083686 199 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm25008-201ENSMUST00000083809 81 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.31□□□□□ -1.72
LdlrP35951 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LdlrP35951 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
LdlrP35951 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
LdlrP35951 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LdlrP35951 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LdlrP35951 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LdlrP35951 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LdlrP35951 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm14669-201ENSMUST00000118841 250 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm12719-201ENSMUST00000118859 241 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm15603-201ENSMUST00000119252 492 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm14240-201ENSMUST00000120353 546 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.3□□□□□ -1.72
LdlrP35951 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm23905-201ENSMUST00000157568 109 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm26354-201ENSMUST00000158221 129 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm22243-201ENSMUST00000178754 120 ntBASIC4.3□□□□□ -1.72
LdlrP35951 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm29045-201ENSMUST00000187278 698 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm21088-201ENSMUST00000190875 316 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm37616-201ENSMUST00000193974 322 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LdlrP35951 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LdlrP35951 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.3□□□□□ -1.72
LdlrP35951 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.3□□□□□ -1.72
LdlrP35951 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LdlrP35951 Gm25853-201ENSMUST00000082793 132 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Olfr575-201ENSMUST00000084812 957 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LdlrP35951 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LdlrP35951 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LdlrP35951 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.3□□□□□ -1.72
LdlrP35951 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
LdlrP35951 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LdlrP35951 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LdlrP35951 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LdlrP35951 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LdlrP35951 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LdlrP35951 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LdlrP35951 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
LdlrP35951 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LdlrP35951 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
LdlrP35951 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LdlrP35951 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LdlrP35951 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.29□□□□□ -1.72
LdlrP35951 Gm15025-201ENSMUST00000118434 418 ntBASIC4.29□□□□□ -1.72
LdlrP35951 Gm15364-201ENSMUST00000119618 585 ntBASIC4.29□□□□□ -1.72
LdlrP35951 Gm12564-201ENSMUST00000119860 321 ntBASIC4.29□□□□□ -1.72
LdlrP35951 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.29□□□□□ -1.72
LdlrP35951 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.29□□□□□ -1.72
LdlrP35951 Gm24965-201ENSMUST00000157922 106 ntBASIC4.29□□□□□ -1.72
LdlrP35951 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms