Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RxraP28700 Gm45209-201ENSMUST00000207122 353 ntBASIC3.95□□□□□ -1.78
RxraP28700 Gm44852-201ENSMUST00000207950 369 ntBASIC3.95□□□□□ -1.78
RxraP28700 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.95□□□□□ -1.78
RxraP28700 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.95□□□□□ -1.78
RxraP28700 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RxraP28700 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RxraP28700 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RxraP28700 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RxraP28700 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RxraP28700 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RxraP28700 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RxraP28700 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RxraP28700 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RxraP28700 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.94□□□□□ -1.78
RxraP28700 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RxraP28700 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Gm15151-201ENSMUST00000117106 177 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm12370-201ENSMUST00000117809 604 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm14172-201ENSMUST00000118255 644 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm14793-201ENSMUST00000118739 311 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
RxraP28700 Gm16250-201ENSMUST00000148974 256 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.94□□□□□ -1.78
RxraP28700 Gm23231-201ENSMUST00000157299 104 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm22211-201ENSMUST00000158097 156 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm22076-201ENSMUST00000158601 84 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm24666-201ENSMUST00000158937 167 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm23379-201ENSMUST00000180026 107 ntBASIC3.94□□□□□ -1.78
RxraP28700 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.94□□□□□ -1.78
RxraP28700 Gm28597-201ENSMUST00000187664 666 ntBASIC3.94□□□□□ -1.78
RxraP28700 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Gm8790-201ENSMUST00000194108 322 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm43853-201ENSMUST00000197162 301 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.94□□□□□ -1.78
RxraP28700 Gm19243-201ENSMUST00000198592 269 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.94□□□□□ -1.78
RxraP28700 Gm19457-201ENSMUST00000200995 448 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm7468-201ENSMUST00000203900 652 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm35876-201ENSMUST00000205044 459 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm45173-201ENSMUST00000206819 305 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm45023-201ENSMUST00000207951 379 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm6240-201ENSMUST00000208014 473 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm45379-201ENSMUST00000211772 549 ntBASIC3.94□□□□□ -1.78
RxraP28700 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm9068-201ENSMUST00000217393 455 ntBASIC3.94□□□□□ -1.78
RxraP28700 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.94□□□□□ -1.78
RxraP28700 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.94□□□□□ -1.78
RxraP28700 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RxraP28700 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RxraP28700 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.94□□□□□ -1.78
RxraP28700 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RxraP28700 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RxraP28700 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.94□□□□□ -1.78
RxraP28700 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.94□□□□□ -1.78
RxraP28700 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.93□□□□□ -1.78
RxraP28700 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RxraP28700 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RxraP28700 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.93□□□□□ -1.78
RxraP28700 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
RxraP28700 Snord66-201ENSMUST00000104051 75 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm12149-201ENSMUST00000117511 654 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm15313-201ENSMUST00000119179 282 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm15112-201ENSMUST00000120152 860 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm14037-201ENSMUST00000120576 313 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm14129-201ENSMUST00000122436 291 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm25104-201ENSMUST00000122476 163 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.93□□□□□ -1.78
RxraP28700 Gm23022-201ENSMUST00000158768 180 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm7241-201ENSMUST00000159853 357 ntBASIC3.93□□□□□ -1.78
RxraP28700 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm22108-201ENSMUST00000177961 106 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm24798-201ENSMUST00000179334 106 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RxraP28700 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.93□□□□□ -1.78
RxraP28700 Mir6960-201ENSMUST00000183449 61 ntBASIC3.93□□□□□ -1.78
RxraP28700 Mir6382-201ENSMUST00000184055 110 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm28283-201ENSMUST00000185509 178 ntBASIC3.93□□□□□ -1.78
RxraP28700 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.93□□□□□ -1.78
RxraP28700 Gm28615-201ENSMUST00000187527 482 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.93□□□□□ -1.78
RxraP28700 Gm30280-201ENSMUST00000192214 262 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.93□□□□□ -1.78
RxraP28700 Gm36984-201ENSMUST00000192770 235 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm18956-201ENSMUST00000192857 480 ntBASIC3.93□□□□□ -1.78
RxraP28700 Gm37732-201ENSMUST00000194377 316 ntBASIC3.93□□□□□ -1.78
RxraP28700 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms