Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.21□□□□□ -1.58
RaraP11416 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.21□□□□□ -1.58
RaraP11416 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RaraP11416 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RaraP11416 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RaraP11416 Gm15102-201ENSMUST00000118740 1502 ntBASIC5.21□□□□□ -1.58
RaraP11416 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.21□□□□□ -1.58
RaraP11416 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RaraP11416 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.21□□□□□ -1.58
RaraP11416 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RaraP11416 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.21□□□□□ -1.58
RaraP11416 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RaraP11416 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RaraP11416 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RaraP11416 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RaraP11416 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RaraP11416 Gm43896-201ENSMUST00000203440 2032 ntBASIC5.2□□□□□ -1.58
RaraP11416 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RaraP11416 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.2□□□□□ -1.58
RaraP11416 Gm12118-201ENSMUST00000119766 532 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm14175-201ENSMUST00000119835 241 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm8289-201ENSMUST00000144814 1182 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm25341-201ENSMUST00000157461 268 ntBASIC5.2□□□□□ -1.58
RaraP11416 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RaraP11416 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC5.2□□□□□ -1.58
RaraP11416 Mir3080-201ENSMUST00000175010 79 ntBASIC5.2□□□□□ -1.58
RaraP11416 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.2□□□□□ -1.58
RaraP11416 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm22259-201ENSMUST00000178926 107 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm27747-201ENSMUST00000184707 85 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC5.2□□□□□ -1.58
RaraP11416 Gm37692-201ENSMUST00000192633 232 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm20056-201ENSMUST00000194813 519 ntBASIC5.2□□□□□ -1.58
RaraP11416 Igkv13-64-201ENSMUST00000198143 343 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.2□□□□□ -1.58
RaraP11416 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.2□□□□□ -1.58
RaraP11416 Gm18904-201ENSMUST00000218756 329 ntBASIC5.2□□□□□ -1.58
RaraP11416 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.2□□□□□ -1.58
RaraP11416 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.2□□□□□ -1.58
RaraP11416 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.2□□□□□ -1.58
RaraP11416 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.2□□□□□ -1.58
RaraP11416 Mir133b-201ENSMUST00000083546 119 ntBASIC5.2□□□□□ -1.58
RaraP11416 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RaraP11416 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RaraP11416 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.2□□□□□ -1.58
RaraP11416 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RaraP11416 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RaraP11416 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
RaraP11416 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.2□□□□□ -1.58
RaraP11416 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RaraP11416 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RaraP11416 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
RaraP11416 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 Gm14429-201ENSMUST00000121881 2024 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RaraP11416 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
RaraP11416 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.19□□□□□ -1.58
RaraP11416 Gm23193-201ENSMUST00000102427 82 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm14753-201ENSMUST00000118503 246 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.19□□□□□ -1.58
RaraP11416 Gm25389-201ENSMUST00000157340 286 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm23901-201ENSMUST00000157570 107 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm24191-201ENSMUST00000157977 122 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.19□□□□□ -1.58
RaraP11416 Gm8114-201ENSMUST00000172225 484 ntBASIC5.19□□□□□ -1.58
RaraP11416 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RaraP11416 Gm27355-201ENSMUST00000185045 128 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm28552-201ENSMUST00000190725 388 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm38076-201ENSMUST00000193889 450 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm6059-201ENSMUST00000196903 340 ntBASIC5.19□□□□□ -1.58
RaraP11416 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.19□□□□□ -1.58
RaraP11416 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.19□□□□□ -1.58
RaraP11416 Gm44825-201ENSMUST00000207557 150 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm44598-201ENSMUST00000207566 150 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm45367-201ENSMUST00000210171 347 ntBASIC5.19□□□□□ -1.58
RaraP11416 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms