Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm21626-201ENSMUST00000177791 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21562-201ENSMUST00000177888 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21539-201ENSMUST00000177925 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm17522-201ENSMUST00000178144 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21599-201ENSMUST00000178249 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21914-201ENSMUST00000178452 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm25198-201ENSMUST00000178574 110 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21723-201ENSMUST00000178692 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21916-201ENSMUST00000178771 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21801-201ENSMUST00000178865 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21633-201ENSMUST00000178941 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21821-201ENSMUST00000179646 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21588-201ENSMUST00000180074 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21780-201ENSMUST00000180128 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21572-201ENSMUST00000180134 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm21529-201ENSMUST00000180175 498 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm29370-202ENSMUST00000187476 499 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm28534-201ENSMUST00000187744 676 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm42593-201ENSMUST00000198469 377 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm42976-201ENSMUST00000200313 222 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm44727-201ENSMUST00000204225 451 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm46233-201ENSMUST00000217831 449 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm23628-201ENSMUST00000082464 173 ntBASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Chmp6P0C0A3 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Mir208b-201ENSMUST00000104735 77 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm13504-201ENSMUST00000117490 316 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm13678-201ENSMUST00000118926 340 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm7308-201ENSMUST00000121087 447 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm11446-201ENSMUST00000121319 866 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm17117-201ENSMUST00000163665 299 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm17655-201ENSMUST00000167969 255 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm19203-201ENSMUST00000174049 939 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm37288-201ENSMUST00000193963 334 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Chmp6P0C0A3 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm16274-201ENSMUST00000139251 592 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm44266-201ENSMUST00000205235 500 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm44964-201ENSMUST00000207011 273 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm45513-201ENSMUST00000210228 376 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm9628-201ENSMUST00000222169 725 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Platr25-208ENSMUST00000222602 939 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm26439-201ENSMUST00000082592 106 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Chmp6P0C0A3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms