Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm29817-201ENSMUST00000210098 172 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm10242-201ENSMUST00000090064 330 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col3a1P08121 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Col3a1P08121 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col3a1P08121 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col3a1P08121 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm7853-201ENSMUST00000100708 478 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm26387-201ENSMUST00000104238 132 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm14788-201ENSMUST00000119457 375 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.92□□□□□ -1.78
Col3a1P08121 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm23380-201ENSMUST00000158448 103 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm37946-201ENSMUST00000192064 347 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm43214-201ENSMUST00000199242 352 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col3a1P08121 Gm43493-201ENSMUST00000199837 202 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Gm45673-201ENSMUST00000210293 358 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.92□□□□□ -1.78
Col3a1P08121 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col3a1P08121 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col3a1P08121 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col3a1P08121 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col3a1P08121 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm12814-201ENSMUST00000117091 846 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm12268-201ENSMUST00000118398 442 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm13640-201ENSMUST00000118445 264 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm13574-201ENSMUST00000120482 394 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm11904-201ENSMUST00000120562 248 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm12006-201ENSMUST00000120786 403 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm14162-201ENSMUST00000121985 601 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Igkv17-134-201ENSMUST00000168310 348 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.91□□□□□ -1.78
Col3a1P08121 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm18520-201ENSMUST00000174783 658 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm18953-201ENSMUST00000175694 300 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21842-201ENSMUST00000177552 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21626-201ENSMUST00000177791 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21562-201ENSMUST00000177888 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21539-201ENSMUST00000177925 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17522-201ENSMUST00000178144 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21599-201ENSMUST00000178249 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21914-201ENSMUST00000178452 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21723-201ENSMUST00000178692 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21916-201ENSMUST00000178771 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21801-201ENSMUST00000178865 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21633-201ENSMUST00000178941 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17412-201ENSMUST00000179261 468 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21821-201ENSMUST00000179646 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21588-201ENSMUST00000180074 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21780-201ENSMUST00000180128 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21572-201ENSMUST00000180134 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm21529-201ENSMUST00000180175 498 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm27308-201ENSMUST00000184807 233 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm27332-201ENSMUST00000184893 112 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm29370-202ENSMUST00000187476 499 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm18698-201ENSMUST00000192327 668 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm38041-201ENSMUST00000194445 661 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm44050-201ENSMUST00000204263 527 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.91□□□□□ -1.78
Col3a1P08121 Gm44654-201ENSMUST00000208052 329 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col3a1P08121 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col3a1P08121 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col3a1P08121 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.91□□□□□ -1.78
Col3a1P08121 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col3a1P08121 Snord14e-201ENSMUST00000082857 90 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms