Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm14355-201ENSMUST00000117352 264 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm14897-201ENSMUST00000118213 207 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm14647-201ENSMUST00000119392 680 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm12893-201ENSMUST00000121732 275 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.04□□□□□ -1.6
Vti1aO89116 Gm14333-201ENSMUST00000130484 264 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm25339-201ENSMUST00000157458 232 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm24847-201ENSMUST00000158032 108 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm20428-201ENSMUST00000174365 283 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm26430-201ENSMUST00000178054 107 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm24713-201ENSMUST00000178850 107 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm21978-201ENSMUST00000179696 377 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm25448-201ENSMUST00000180065 107 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm24518-201ENSMUST00000180275 94 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Gm27834-201ENSMUST00000183427 125 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Mir6960-201ENSMUST00000183449 61 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm27414-201ENSMUST00000185033 381 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.04□□□□□ -1.6
Vti1aO89116 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.04□□□□□ -1.6
Vti1aO89116 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC5.04□□□□□ -1.6
Vti1aO89116 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.04□□□□□ -1.6
Vti1aO89116 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.04□□□□□ -1.6
Vti1aO89116 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Gm23464-201ENSMUST00000083145 147 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.04□□□□□ -1.6
Vti1aO89116 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Vti1aO89116 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Vti1aO89116 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Vti1aO89116 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Vti1aO89116 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.04□□□□□ -1.6
Vti1aO89116 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Vti1aO89116 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Vti1aO89116 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vti1aO89116 Gm22021-201ENSMUST00000104353 107 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.03□□□□□ -1.6
Vti1aO89116 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm14001-201ENSMUST00000118847 247 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm14919-201ENSMUST00000120839 390 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm11430-201ENSMUST00000121317 217 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
Vti1aO89116 Gm22480-201ENSMUST00000122568 128 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm23743-201ENSMUST00000157389 274 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm24499-201ENSMUST00000158446 104 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm23191-201ENSMUST00000179147 107 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm24520-201ENSMUST00000179510 110 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Vti1aO89116 Gm27190-201ENSMUST00000184890 542 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm29228-201ENSMUST00000185489 418 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Mir6375-201ENSMUST00000197176 95 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Vti1aO89116 Gm9309-201ENSMUST00000223537 546 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vti1aO89116 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Vti1aO89116 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Vti1aO89116 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Vti1aO89116 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vti1aO89116 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Vti1aO89116 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.03□□□□□ -1.6
Vti1aO89116 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Vti1aO89116 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Vti1aO89116 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.02□□□□□ -1.61
Vti1aO89116 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Vti1aO89116 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.02□□□□□ -1.61
Vti1aO89116 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.02□□□□□ -1.61
Vti1aO89116 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.02□□□□□ -1.61
Vti1aO89116 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.02□□□□□ -1.61
Vti1aO89116 Gm23746-201ENSMUST00000104229 125 ntBASIC5.02□□□□□ -1.61
Vti1aO89116 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Vti1aO89116 Gm11625-201ENSMUST00000119535 296 ntBASIC5.02□□□□□ -1.61
Vti1aO89116 Gm15745-201ENSMUST00000119807 115 ntBASIC5.02□□□□□ -1.61
Vti1aO89116 Gm14821-201ENSMUST00000121975 435 ntBASIC5.02□□□□□ -1.61
Vti1aO89116 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.02□□□□□ -1.61
Vti1aO89116 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Vti1aO89116 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Vti1aO89116 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.02□□□□□ -1.61
Vti1aO89116 Gm22216-201ENSMUST00000157557 114 ntBASIC5.02□□□□□ -1.61
Vti1aO89116 Gm24240-201ENSMUST00000157785 135 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms