Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm28917-201ENSMUST00000187294 237 ntBASIC3.36□□□□□ -1.87
ClppO88696 Gm28766-201ENSMUST00000191086 234 ntBASIC3.36□□□□□ -1.87
ClppO88696 Gm5829-201ENSMUST00000191383 351 ntBASIC3.36□□□□□ -1.87
ClppO88696 Gm6680-201ENSMUST00000192789 950 ntBASIC3.36□□□□□ -1.87
ClppO88696 Gm42832-201ENSMUST00000196361 745 ntBASIC3.36□□□□□ -1.87
ClppO88696 Gm43217-201ENSMUST00000199513 367 ntBASIC3.36□□□□□ -1.87
ClppO88696 Gm36776-201ENSMUST00000207006 203 ntBASIC3.36□□□□□ -1.87
ClppO88696 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.36□□□□□ -1.87
ClppO88696 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.36□□□□□ -1.87
ClppO88696 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ClppO88696 Gm10088-201ENSMUST00000074116 423 ntBASIC3.36□□□□□ -1.87
ClppO88696 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ClppO88696 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.36□□□□□ -1.87
ClppO88696 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.36□□□□□ -1.87
ClppO88696 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.36□□□□□ -1.87
ClppO88696 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ClppO88696 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ClppO88696 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ClppO88696 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
ClppO88696 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ClppO88696 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.36□□□□□ -1.87
ClppO88696 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ClppO88696 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.35□□□□□ -1.87
ClppO88696 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ClppO88696 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ClppO88696 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ClppO88696 Gm22497-201ENSMUST00000104499 131 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.35□□□□□ -1.87
ClppO88696 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm13603-201ENSMUST00000119404 83 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm25109-201ENSMUST00000122474 114 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.35□□□□□ -1.87
ClppO88696 Gm25883-201ENSMUST00000157781 271 ntBASIC3.35□□□□□ -1.87
ClppO88696 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ClppO88696 Gm20648-201ENSMUST00000175815 328 ntBASIC3.35□□□□□ -1.87
ClppO88696 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.35□□□□□ -1.87
ClppO88696 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ClppO88696 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ClppO88696 Gm27342-201ENSMUST00000183530 109 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.35□□□□□ -1.87
ClppO88696 Gm29365-201ENSMUST00000189461 699 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm28466-201ENSMUST00000190678 659 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm5551-201ENSMUST00000199720 690 ntBASIC3.35□□□□□ -1.87
ClppO88696 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ClppO88696 Gm5317-201ENSMUST00000204445 847 ntBASIC3.35□□□□□ -1.87
ClppO88696 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.35□□□□□ -1.87
ClppO88696 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.35□□□□□ -1.87
ClppO88696 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.35□□□□□ -1.87
ClppO88696 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.35□□□□□ -1.87
ClppO88696 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm35558-202ENSMUST00000221819 499 ntBASIC3.35□□□□□ -1.87
ClppO88696 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.35□□□□□ -1.87
ClppO88696 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.35□□□□□ -1.87
ClppO88696 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.35□□□□□ -1.87
ClppO88696 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.35□□□□□ -1.87
ClppO88696 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ClppO88696 AF357428-201ENSMUST00000083815 69 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm22864-201ENSMUST00000083950 130 ntBASIC3.35□□□□□ -1.87
ClppO88696 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ClppO88696 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.35□□□□□ -1.87
ClppO88696 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.35□□□□□ -1.87
ClppO88696 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ClppO88696 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ClppO88696 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ClppO88696 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ClppO88696 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.34□□□□□ -1.87
ClppO88696 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
ClppO88696 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm24951-201ENSMUST00000102182 109 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm23175-201ENSMUST00000104371 132 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm23530-201ENSMUST00000104564 137 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm25560-201ENSMUST00000104606 176 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm5762-201ENSMUST00000119204 258 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm14570-201ENSMUST00000119444 391 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm12739-201ENSMUST00000119769 382 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm6591-201ENSMUST00000121063 434 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm13555-201ENSMUST00000121668 319 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.34□□□□□ -1.87
ClppO88696 Gm9785-202ENSMUST00000144563 593 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.34□□□□□ -1.87
ClppO88696 Gm25341-201ENSMUST00000157461 268 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm24060-201ENSMUST00000157494 95 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm2966-201ENSMUST00000166052 481 ntBASIC3.34□□□□□ -1.87
ClppO88696 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.34□□□□□ -1.87
ClppO88696 Mir6405-201ENSMUST00000184584 124 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm27477-201ENSMUST00000184649 143 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm18667-201ENSMUST00000186523 484 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm38329-201ENSMUST00000193473 427 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm43115-201ENSMUST00000196244 160 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm29920-201ENSMUST00000206876 754 ntBASIC3.34□□□□□ -1.87
ClppO88696 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ClppO88696 Gm45530-201ENSMUST00000211658 225 ntBASIC3.34□□□□□ -1.87
ClppO88696 Gm18015-201ENSMUST00000214879 316 ntBASIC3.34□□□□□ -1.87
ClppO88696 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms