Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm28896-201ENSMUST00000188609 696 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm29268-201ENSMUST00000188669 615 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm28506-201ENSMUST00000189937 150 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm28978-201ENSMUST00000191120 615 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm37172-201ENSMUST00000191926 615 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm18956-201ENSMUST00000192857 480 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm37054-201ENSMUST00000193481 543 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm38107-201ENSMUST00000194873 696 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm44391-201ENSMUST00000198490 93 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm43083-201ENSMUST00000199594 476 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm42850-201ENSMUST00000202094 201 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm44779-201ENSMUST00000206937 708 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm20102-201ENSMUST00000222445 220 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 CT025602.1-201ENSMUST00000227281 382 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm23627-201ENSMUST00000082459 107 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm22502-201ENSMUST00000082488 107 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm22977-201ENSMUST00000082615 107 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm24149-201ENSMUST00000082757 107 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm26263-201ENSMUST00000083281 164 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Rpl35aO55142 Gm37696-201ENSMUST00000194223 3349 ntBASIC3.4□□□□□ -1.87
Rpl35aO55142 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
Rpl35aO55142 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Rpl35aO55142 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm24469-201ENSMUST00000104487 131 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Mir294-201ENSMUST00000104710 84 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm24855-201ENSMUST00000104848 97 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm24831-201ENSMUST00000116778 126 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm14657-201ENSMUST00000117461 302 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm11408-201ENSMUST00000117889 519 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm14878-201ENSMUST00000118167 293 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm15333-201ENSMUST00000118825 364 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm8880-201ENSMUST00000121800 454 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm25807-201ENSMUST00000122783 305 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm24774-201ENSMUST00000157384 134 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm28399-201ENSMUST00000186221 318 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm28572-201ENSMUST00000187444 318 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm28615-201ENSMUST00000187527 482 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm37455-201ENSMUST00000191993 529 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.39□□□□□ -1.87
Rpl35aO55142 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm42663-201ENSMUST00000199883 351 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm17956-201ENSMUST00000199931 838 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm43976-201ENSMUST00000203637 235 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm44687-201ENSMUST00000204975 235 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm45523-201ENSMUST00000210712 799 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.39□□□□□ -1.87
Rpl35aO55142 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rpl35aO55142 AC154626.1-201ENSMUST00000226070 311 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Rpl35aO55142 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Snord21-201ENSMUST00000082519 94 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm26111-201ENSMUST00000083969 106 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Rpl35aO55142 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Rpl35aO55142 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Rpl35aO55142 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC3.39□□□□□ -1.87
Rpl35aO55142 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.39□□□□□ -1.87
Rpl35aO55142 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Rpl35aO55142 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Rpl35aO55142 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Rpl35aO55142 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rpl35aO55142 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rpl35aO55142 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rpl35aO55142 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rpl35aO55142 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Rpl35aO55142 Gm23709-201ENSMUST00000104364 130 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Gm22498-201ENSMUST00000104497 86 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rpl35aO55142 Gm14537-201ENSMUST00000117464 599 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Gm2066-201ENSMUST00000118046 389 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Gm7363-201ENSMUST00000119883 399 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.38□□□□□ -1.87
Rpl35aO55142 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.38□□□□□ -1.87
Rpl35aO55142 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms