Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm26129-201ENSMUST00000082719 107 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Hmgb3O54879 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.22□□□□□ -2.05
Hmgb3O54879 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.21□□□□□ -2.05
Hmgb3O54879 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm24125-201ENSMUST00000104105 137 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm25727-201ENSMUST00000104522 131 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm11460-201ENSMUST00000118200 361 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm14607-201ENSMUST00000119119 491 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm13676-201ENSMUST00000122185 591 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm14389-201ENSMUST00000140453 241 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm24443-201ENSMUST00000157242 132 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm24436-201ENSMUST00000157889 302 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm23312-201ENSMUST00000158774 102 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm25839-201ENSMUST00000158921 103 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm19898-201ENSMUST00000177490 251 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm9696-202ENSMUST00000191541 830 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.21□□□□□ -2.06
Hmgb3O54879 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm44399-201ENSMUST00000205043 226 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm46369-201ENSMUST00000221577 401 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm9174-201ENSMUST00000078149 255 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm23925-201ENSMUST00000082471 132 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm26176-201ENSMUST00000083795 105 ntBASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Hmgb3O54879 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Hmgb3O54879 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Hmgb3O54879 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm25097-201ENSMUST00000104042 145 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm24376-201ENSMUST00000104399 127 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm14069-201ENSMUST00000120815 229 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm6591-201ENSMUST00000121063 434 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm22380-201ENSMUST00000157479 95 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm24681-201ENSMUST00000158760 107 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm22530-201ENSMUST00000158820 118 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.2□□□□□ -2.06
Hmgb3O54879 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm27834-201ENSMUST00000183427 125 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm27773-201ENSMUST00000184087 78 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm27786-201ENSMUST00000184337 70 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm27608-201ENSMUST00000184822 162 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm28591-201ENSMUST00000185259 183 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm37085-201ENSMUST00000193780 196 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm42593-201ENSMUST00000198469 377 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.2□□□□□ -2.06
Hmgb3O54879 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.2□□□□□ -2.06
Hmgb3O54879 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm17987-201ENSMUST00000206902 603 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm45316-201ENSMUST00000210128 162 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Hmgb3O54879 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm22043-201ENSMUST00000082993 158 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Hmgb3O54879 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.2□□□□□ -2.06
Hmgb3O54879 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm22658-201ENSMUST00000104196 155 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm25272-201ENSMUST00000104293 128 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm14825-201ENSMUST00000113538 701 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm14795-201ENSMUST00000118461 471 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms