Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm29330-201ENSMUST00000190032 699 ntBASIC4.28□□□□□ -1.72
Ccdc180J3QNE4 Gm28098-201ENSMUST00000191361 699 ntBASIC4.28□□□□□ -1.72
Ccdc180J3QNE4 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Ccdc180J3QNE4 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 Gm8338-201ENSMUST00000163928 363 ntBASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 Gm17030-201ENSMUST00000167016 393 ntBASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 Gm46389-201ENSMUST00000223199 392 ntBASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 Gm37895-201ENSMUST00000192448 4550 ntBASIC4.27□□□□□ -1.73
Ccdc180J3QNE4 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Gm13439-201ENSMUST00000117541 409 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Gm24369-201ENSMUST00000175387 96 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 AC132384.11-201ENSMUST00000219676 178 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Mir322-201ENSMUST00000083484 95 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Mir669d-201ENSMUST00000104644 121 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Gm24771-201ENSMUST00000158508 137 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Gm22264-201ENSMUST00000178200 107 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Gm18327-201ENSMUST00000202426 830 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc180J3QNE4 Mir6406-201ENSMUST00000183592 120 ntBASIC4.25□□□□□ -1.73
Ccdc180J3QNE4 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.25□□□□□ -1.73
Ccdc180J3QNE4 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc180J3QNE4 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc180J3QNE4 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc180J3QNE4 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc180J3QNE4 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc180J3QNE4 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Trav20-201ENSMUST00000142754 347 ntBASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
Ccdc180J3QNE4 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc180J3QNE4 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.23□□□□□ -1.73
Ccdc180J3QNE4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc180J3QNE4 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc180J3QNE4 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Mir6405-201ENSMUST00000184584 124 ntBASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Gm14912-201ENSMUST00000120166 1773 ntBASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Gm12213-201ENSMUST00000119924 353 ntBASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Gm22423-201ENSMUST00000082861 184 ntBASIC4.22□□□□□ -1.73
Ccdc180J3QNE4 Gm38214-201ENSMUST00000192581 988 ntBASIC4.21□□□□□ -1.74
Ccdc180J3QNE4 Gm43626-201ENSMUST00000198575 162 ntBASIC4.21□□□□□ -1.74
Ccdc180J3QNE4 AC166358.6-201ENSMUST00000221834 1206 ntBASIC4.21□□□□□ -1.74
Ccdc180J3QNE4 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc180J3QNE4 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc180J3QNE4 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Ccdc180J3QNE4 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc180J3QNE4 Gm37579-201ENSMUST00000194291 142 ntBASIC4.2□□□□□ -1.74
Ccdc180J3QNE4 Gm43427-201ENSMUST00000198188 331 ntBASIC4.2□□□□□ -1.74
Ccdc180J3QNE4 Gm42818-201ENSMUST00000198869 987 ntBASIC4.2□□□□□ -1.74
Ccdc180J3QNE4 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.2□□□□□ -1.74
Ccdc180J3QNE4 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc180J3QNE4 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm22858-201ENSMUST00000174972 76 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm23162-201ENSMUST00000175081 121 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm21959-201ENSMUST00000178439 452 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm28064-201ENSMUST00000185639 858 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm37616-201ENSMUST00000193974 322 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm14794-201ENSMUST00000118181 192 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm22806-201ENSMUST00000082738 136 ntBASIC4.19□□□□□ -1.74
Ccdc180J3QNE4 Gm15936-201ENSMUST00000118706 460 ntBASIC4.18□□□□□ -1.74
Ccdc180J3QNE4 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC4.18□□□□□ -1.74
Ccdc180J3QNE4 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms