Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm28097-201ENSMUST00000187333 366 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm28468-201ENSMUST00000188536 615 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm44373-201ENSMUST00000196112 169 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm44391-201ENSMUST00000198490 93 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm42814-201ENSMUST00000199370 460 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm44076-201ENSMUST00000203072 520 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm5322-201ENSMUST00000206142 699 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm45031-201ENSMUST00000206800 288 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm18904-201ENSMUST00000218756 329 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.68□□□□□ -1.66
Trim55G3X8Y1 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Mir202-201ENSMUST00000083568 72 ntBASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim55G3X8Y1 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm22472-201ENSMUST00000104115 134 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm12571-201ENSMUST00000118132 243 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm11798-201ENSMUST00000119150 421 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm13711-201ENSMUST00000119708 453 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm12294-201ENSMUST00000119723 490 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm13092-201ENSMUST00000136346 260 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm6969-201ENSMUST00000140065 342 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm25624-201ENSMUST00000157222 275 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm23068-201ENSMUST00000158239 293 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm25603-201ENSMUST00000158361 105 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm22940-201ENSMUST00000158560 155 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm22917-201ENSMUST00000180116 110 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm28008-201ENSMUST00000184021 186 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Mir6986-201ENSMUST00000184483 58 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm28579-201ENSMUST00000186143 369 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Mir7682-201ENSMUST00000198467 58 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm26263-201ENSMUST00000083281 164 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm23741-201ENSMUST00000097237 171 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim55G3X8Y1 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm24789-201ENSMUST00000104282 131 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm23322-201ENSMUST00000104464 167 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm24835-201ENSMUST00000116777 111 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm22195-201ENSMUST00000116861 108 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm14890-201ENSMUST00000117660 676 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm14175-201ENSMUST00000119835 241 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm23411-201ENSMUST00000157988 62 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm16569-201ENSMUST00000160526 314 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm26318-201ENSMUST00000176507 96 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28418-201ENSMUST00000186179 423 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms