Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm23028-201ENSMUST00000158773 265 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm27783-201ENSMUST00000183534 105 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Mir7050-201ENSMUST00000184636 60 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm27163-201ENSMUST00000184767 409 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm43010-201ENSMUST00000195993 2878 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm25097-201ENSMUST00000104042 145 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm6274-201ENSMUST00000118173 797 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm15951-201ENSMUST00000118377 400 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm26194-201ENSMUST00000175036 71 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm2092-201ENSMUST00000178887 639 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm2759-201ENSMUST00000179938 639 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm29064-201ENSMUST00000187014 813 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 AC109214.2-201ENSMUST00000220089 358 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm24817-201ENSMUST00000093672 105 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.19□□□□□ -1.9
Shank1D3YZU1 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shank1D3YZU1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm14622-201ENSMUST00000117117 468 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm5762-201ENSMUST00000119204 258 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm13557-201ENSMUST00000120771 382 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm11404-201ENSMUST00000120872 494 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm15466-201ENSMUST00000122299 333 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm22011-201ENSMUST00000158790 123 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm17177-201ENSMUST00000169144 483 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Mir6916-201ENSMUST00000184514 63 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm5058-201ENSMUST00000187331 463 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm45146-201ENSMUST00000207108 221 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm13831-201ENSMUST00000118764 302 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm13873-201ENSMUST00000119208 427 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm12825-201ENSMUST00000120249 563 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm13751-201ENSMUST00000120280 752 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm8840-201ENSMUST00000122454 386 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm14651-201ENSMUST00000147192 442 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm26100-201ENSMUST00000157245 127 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm5551-201ENSMUST00000199720 690 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm19366-201ENSMUST00000206996 156 ntBASIC3.18□□□□□ -1.9
Shank1D3YZU1 Gm17991-201ENSMUST00000208139 297 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms