Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm15018-201ENSMUST00000117090 633 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm15988-201ENSMUST00000118677 367 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm25902-201ENSMUST00000158493 318 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm27522-201ENSMUST00000183949 230 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm28439-201ENSMUST00000187714 876 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm37417-201ENSMUST00000195257 454 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm25203-202ENSMUST00000200458 216 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm43967-201ENSMUST00000203787 301 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm45105-201ENSMUST00000207824 397 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm5655-201ENSMUST00000221078 901 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Vmn1r89-206ENSMUST00000227319 985 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Gm25203-201ENSMUST00000082842 215 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.22□□□□□ -2.05
Trav6n-5A0A075B621 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.05
Trav6n-5A0A075B621 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.05
Trav6n-5A0A075B621 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Mir690-201ENSMUST00000102110 109 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm24469-201ENSMUST00000104487 131 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm11285-201ENSMUST00000118443 322 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm6762-201ENSMUST00000121769 289 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm8840-201ENSMUST00000122454 386 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm23325-201ENSMUST00000157422 129 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Nron-204ENSMUST00000158971 370 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm26219-201ENSMUST00000175216 71 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm26297-201ENSMUST00000179464 132 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm28390-201ENSMUST00000185212 700 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm4854-201ENSMUST00000185902 574 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm29740-201ENSMUST00000193182 655 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm32447-201ENSMUST00000194265 697 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm37002-201ENSMUST00000194560 373 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm43096-201ENSMUST00000196173 421 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm43478-201ENSMUST00000200381 292 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm44137-201ENSMUST00000203670 367 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm19219-201ENSMUST00000215863 724 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Gm3565-201ENSMUST00000222670 609 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav6n-5A0A075B621 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Mir499-201ENSMUST00000102357 79 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm15560-201ENSMUST00000117107 643 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm13731-201ENSMUST00000117332 196 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm16431-201ENSMUST00000117454 431 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm12268-201ENSMUST00000118398 442 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm13973-201ENSMUST00000121371 894 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm14695-201ENSMUST00000121721 282 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm25058-201ENSMUST00000157365 128 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm26349-201ENSMUST00000157530 130 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm37288-201ENSMUST00000193963 334 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm44688-201ENSMUST00000209083 537 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.2□□□□□ -2.06
Trav6n-5A0A075B621 Gm6012-201ENSMUST00000210821 730 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms