Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm7408-201ENSMUST00000178014 639 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm7386-201ENSMUST00000178020 639 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm3657-201ENSMUST00000178170 639 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm7415-201ENSMUST00000178205 639 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm7391-201ENSMUST00000178680 639 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm8649-201ENSMUST00000181799 233 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm18505-201ENSMUST00000187360 790 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm29107-201ENSMUST00000190910 347 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm19418-201ENSMUST00000197436 580 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm43559-201ENSMUST00000198755 466 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm7786-201ENSMUST00000210494 436 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm18557-201ENSMUST00000218710 433 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm24150-201ENSMUST00000082759 104 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm22265-201ENSMUST00000082947 116 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm24921-201ENSMUST00000083024 107 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm22293-201ENSMUST00000083314 109 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm12598-201ENSMUST00000117333 830 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm12016-201ENSMUST00000119079 681 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm12578-201ENSMUST00000121244 417 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm3111-201ENSMUST00000167426 490 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm23365-201ENSMUST00000175019 125 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm25960-201ENSMUST00000175110 125 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm44453-201ENSMUST00000175161 126 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm25999-201ENSMUST00000175398 133 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm25195-201ENSMUST00000177656 126 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm19224-201ENSMUST00000190477 793 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm37641-201ENSMUST00000193837 239 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm7449-201ENSMUST00000194393 663 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm5552-201ENSMUST00000197149 515 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm45379-201ENSMUST00000211772 549 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm18507-201ENSMUST00000218855 525 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm25126-201ENSMUST00000083343 102 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
H2afb1S4R1E0 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm14579-201ENSMUST00000117068 283 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm24060-201ENSMUST00000157494 95 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm23257-201ENSMUST00000158322 132 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm16588-201ENSMUST00000162889 355 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm8296-201ENSMUST00000185597 524 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms