Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nubp1Q9R060 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm24987-201ENSMUST00000104453 134 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Snord19-201ENSMUST00000104609 76 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm14894-201ENSMUST00000117170 270 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm13537-201ENSMUST00000120467 267 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm13210-201ENSMUST00000121483 273 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm15065-201ENSMUST00000121699 273 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm25321-201ENSMUST00000122558 102 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm25220-201ENSMUST00000157546 95 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm16318-201ENSMUST00000162402 601 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm20450-201ENSMUST00000173652 147 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm25071-201ENSMUST00000175232 70 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm24303-201ENSMUST00000178237 126 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Spin2g-201ENSMUST00000178425 687 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm29479-201ENSMUST00000190352 455 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm37449-201ENSMUST00000193016 270 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm18658-201ENSMUST00000195558 270 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm42799-201ENSMUST00000201331 328 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 AC121942.2-201ENSMUST00000223824 600 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.26□□□□□ -1.57
Nubp1Q9R060 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Nubp1Q9R060 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm17014-201ENSMUST00000120765 168 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm16354-201ENSMUST00000155376 150 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm23982-201ENSMUST00000157141 106 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm22867-201ENSMUST00000157499 109 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm23280-201ENSMUST00000157905 139 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm26028-201ENSMUST00000158660 294 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm22355-201ENSMUST00000175531 96 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm24799-201ENSMUST00000178431 79 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm27470-201ENSMUST00000184070 210 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm29022-201ENSMUST00000190702 225 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm37417-201ENSMUST00000195257 454 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm43749-201ENSMUST00000199345 352 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm32158-201ENSMUST00000200135 404 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm36189-201ENSMUST00000204113 523 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm19256-201ENSMUST00000218550 231 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm18618-201ENSMUST00000222211 473 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm5321-201ENSMUST00000072050 447 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm23042-201ENSMUST00000083866 101 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm5596-201ENSMUST00000207988 2421 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.25□□□□□ -1.57
Nubp1Q9R060 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms