Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm38332-201ENSMUST00000194189 147 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm45259-201ENSMUST00000209217 1006 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3□□□□□ -1.93
Scn11aQ9R053 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3□□□□□ -1.93
Scn11aQ9R053 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Scn11aQ9R053 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Scn11aQ9R053 Gm23444-201ENSMUST00000082922 191 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Gm24212-201ENSMUST00000158258 132 ntBASIC2.99□□□□□ -1.93
Scn11aQ9R053 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.99□□□□□ -1.93
Scn11aQ9R053 Gm28923-201ENSMUST00000187755 322 ntBASIC2.99□□□□□ -1.93
Scn11aQ9R053 Gm44477-201ENSMUST00000199661 110 ntBASIC2.99□□□□□ -1.93
Scn11aQ9R053 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Scn11aQ9R053 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC2.98□□□□□ -1.93
Scn11aQ9R053 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.98□□□□□ -1.93
Scn11aQ9R053 Gm43669-201ENSMUST00000198229 436 ntBASIC2.98□□□□□ -1.93
Scn11aQ9R053 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.98□□□□□ -1.93
Scn11aQ9R053 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.98□□□□□ -1.93
Scn11aQ9R053 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.98□□□□□ -1.93
Scn11aQ9R053 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.98□□□□□ -1.93
Scn11aQ9R053 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Scn11aQ9R053 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm37579-201ENSMUST00000194291 142 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm45296-201ENSMUST00000209625 205 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm5175-202ENSMUST00000219699 529 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Scn11aQ9R053 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm28637-201ENSMUST00000179424 345 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm28788-201ENSMUST00000189717 375 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm29558-201ENSMUST00000190134 375 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm44903-201ENSMUST00000206840 130 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Gm18871-201ENSMUST00000218655 745 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.97□□□□□ -1.93
Scn11aQ9R053 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Scn11aQ9R053 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Scn11aQ9R053 Gm16383-201ENSMUST00000118122 232 ntBASIC2.96□□□□□ -1.94
Scn11aQ9R053 Gm13862-201ENSMUST00000121220 197 ntBASIC2.96□□□□□ -1.94
Scn11aQ9R053 Gm22116-201ENSMUST00000158791 141 ntBASIC2.96□□□□□ -1.94
Scn11aQ9R053 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Scn11aQ9R053 Gm19224-201ENSMUST00000190477 793 ntBASIC2.96□□□□□ -1.94
Scn11aQ9R053 Gm37837-201ENSMUST00000191743 604 ntBASIC2.96□□□□□ -1.94
Scn11aQ9R053 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.96□□□□□ -1.94
Scn11aQ9R053 Gm45772-201ENSMUST00000212961 240 ntBASIC2.96□□□□□ -1.94
Scn11aQ9R053 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.96□□□□□ -1.94
Scn11aQ9R053 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Scn11aQ9R053 n-R5s220-201ENSMUST00000082926 120 ntBASIC2.96□□□□□ -1.94
Scn11aQ9R053 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Scn11aQ9R053 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Scn11aQ9R053 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm6565-201ENSMUST00000121217 438 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm25048-201ENSMUST00000158598 91 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm16232-201ENSMUST00000162856 167 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Scn11aQ9R053 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Scn11aQ9R053 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm18346-201ENSMUST00000216782 325 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm25421-201ENSMUST00000104218 164 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm12849-201ENSMUST00000120013 739 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm13471-201ENSMUST00000122057 433 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm24317-201ENSMUST00000178536 107 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm27330-201ENSMUST00000184689 132 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm28974-201ENSMUST00000187893 231 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm44060-201ENSMUST00000204440 410 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Gm7588-201ENSMUST00000216866 571 ntBASIC2.95□□□□□ -1.94
Scn11aQ9R053 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Scn11aQ9R053 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Scn11aQ9R053 Gm25068-201ENSMUST00000103895 110 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms