Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm12304-201ENSMUST00000120312 385 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm22225-201ENSMUST00000157358 278 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm16102-201ENSMUST00000160955 420 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm37784-201ENSMUST00000193233 189 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm36954-201ENSMUST00000195362 363 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 AC133598.4-202ENSMUST00000225267 469 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm6462-201ENSMUST00000081488 304 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Msh5Q9QUM7 Gm43283-201ENSMUST00000199138 2548 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm15313-201ENSMUST00000119179 282 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Defa-ps8-201ENSMUST00000120972 279 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm14732-201ENSMUST00000121372 545 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 n-R5s192-201ENSMUST00000122577 119 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm24084-201ENSMUST00000175173 137 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm29489-201ENSMUST00000188934 324 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm37358-201ENSMUST00000195492 479 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Mir465d-201ENSMUST00000196314 58 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm44108-201ENSMUST00000203525 422 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm26055-201ENSMUST00000083038 107 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm26495-201ENSMUST00000083152 137 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.05□□□□□ -1.44
Msh5Q9QUM7 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm15781-201ENSMUST00000120216 323 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm5396-201ENSMUST00000121222 532 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm25980-201ENSMUST00000157176 218 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Mir1945-201ENSMUST00000157919 78 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm20526-201ENSMUST00000173416 158 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm37375-201ENSMUST00000193859 387 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm37385-201ENSMUST00000195223 387 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm43978-201ENSMUST00000203491 451 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm5229-201ENSMUST00000039375 354 ntBASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msh5Q9QUM7 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.03□□□□□ -1.44
Msh5Q9QUM7 Gm13213-201ENSMUST00000119668 474 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms