Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Gm25403-201ENSMUST00000082971 143 ntBASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.92□□□□□ -1.94
Trem1Q9JKE2 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm24281-201ENSMUST00000104234 136 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm26145-201ENSMUST00000104476 127 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm25726-201ENSMUST00000104529 129 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm15936-201ENSMUST00000118706 460 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm16005-201ENSMUST00000120515 269 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm22769-201ENSMUST00000158367 98 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm24552-201ENSMUST00000158646 103 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Mir7676-1-201ENSMUST00000183491 62 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Mir7676-2-201ENSMUST00000183523 62 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm27599-201ENSMUST00000183758 174 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm28685-201ENSMUST00000187545 1101 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm42926-201ENSMUST00000200496 697 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm44399-201ENSMUST00000205043 226 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm45209-201ENSMUST00000207122 353 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm18338-201ENSMUST00000222381 560 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm25202-201ENSMUST00000082838 191 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm25126-201ENSMUST00000083343 102 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Gm21286-201ENSMUST00000098035 545 ntBASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trem1Q9JKE2 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Trem1Q9JKE2 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm14971-201ENSMUST00000117980 663 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm13424-201ENSMUST00000122301 354 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm11506-201ENSMUST00000122414 470 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm16250-201ENSMUST00000148974 256 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm22034-201ENSMUST00000157283 134 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm23023-201ENSMUST00000158767 109 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm24080-201ENSMUST00000175178 232 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm22120-201ENSMUST00000175590 70 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21756-201ENSMUST00000178380 930 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21405-201ENSMUST00000179024 930 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21241-201ENSMUST00000179551 934 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm24968-201ENSMUST00000179817 107 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm11394-201ENSMUST00000181421 517 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21191-201ENSMUST00000186484 930 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm29503-201ENSMUST00000191044 930 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm20819-201ENSMUST00000191091 925 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm20871-201ENSMUST00000191322 931 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm37670-201ENSMUST00000193622 229 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm43659-201ENSMUST00000200894 628 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms